m band Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines. (Gene Ontology, GO_0031430)
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Genes

107 proteins co-occuring with the m band cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
MYOM2 myomesin 2 2.80961
TTN titin 2.69746
OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF 2.22541
MYOM1 myomesin 1 1.89801
CKM creatine kinase, muscle 1.31735
TRIM55 tripartite motif containing 55 1.21946
TRIM54 tripartite motif containing 54 1.17209
TRIM63 tripartite motif containing 63, E3 ubiquitin protein ligase 1.12347
CAPN3 calpain 3, (p94) 1.09696
NEB nebulin 1.07308
OBSL1 obscurin-like 1 1.06044
ANK1 ankyrin 1, erythrocytic 0.982932
MYOM3 myomesin 3 0.963107
NRAP nebulin-related anchoring protein 0.961667
LRRC39 leucine rich repeat containing 39 0.911579
ENO3 enolase 3 (beta, muscle) 0.877791
KCTD6 potassium channel tetramerization domain containing 6 0.866287
MYBPC2 myosin binding protein C, fast type 0.826794
SPTB spectrin, beta, erythrocytic 0.784614
ANK2 ankyrin 2, neuronal 0.740965
TCAP titin-cap 0.689013
GMEB1 glucocorticoid modulatory element binding protein 1 0.671159
USP13 ubiquitin specific peptidase 13 (isopeptidase T-3) 0.65905
MYBPC3 myosin binding protein C, cardiac 0.657757
DMD dystrophin 0.645716
UNC45B unc-45 homolog B (C. elegans) 0.640573
FHL2 four and a half LIM domains 2 0.640573
ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle) 0.624781
MEX3D mex-3 RNA binding family member D 0.603174
FN1 fibronectin 1 0.603174
TPM1 tropomyosin 1 (alpha) 0.589714
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 0.578416
ZC3H13 zinc finger CCCH-type containing 13 0.575495
FERMT2 fermitin family member 2 0.541529
CMYA5 cardiomyopathy associated 5 0.538649
MYH13 myosin, heavy chain 13, skeletal muscle 0.514085
NBR1 neighbor of BRCA1 gene 1 0.51164
YIPF2 Yip1 domain family, member 2 0.510418
PARVA parvin, alpha 0.50879
SMYD1 SET and MYND domain containing 1 0.476027
COPG1 coatomer protein complex, subunit gamma 1 0.473215
TNNT2 troponin T type 2 (cardiac) 0.4672
PROK2 prokineticin 2 0.466799
XIRP1 xin actin binding repeat containing 1 0.460001
MYBPC1 myosin binding protein C, slow type 0.442104
KIF1BP KIF1 binding protein 0.441708
TMBIM4 transmembrane BAX inhibitor motif containing 4 0.440916
CCT2 chaperonin containing TCP1, subunit 2 (beta) 0.436565
NUAK1 NUAK family, SNF1-like kinase, 1 0.435775
NUAK2 NUAK family, SNF1-like kinase, 2 0.434985
COMT catechol-O-methyltransferase 0.433801
PYGB phosphorylase, glycogen; brain 0.431041
PYGL phosphorylase, glycogen, liver 0.430647
PYGM phosphorylase, glycogen, muscle 0.428678
ZFPM1 zinc finger protein, FOG family member 1 0.425138
CKMT2 creatine kinase, mitochondrial 2 (sarcomeric) 0.416902
XIRP2 xin actin binding repeat containing 2 0.415728
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.414946
MEI1 meiosis inhibitor 1 0.410649
TMOD3 tropomodulin 3 (ubiquitous) 0.395873
ZYX zyxin 0.381969
SYNPO2 synaptopodin 2 0.348346
PTER phosphotriesterase related 0.34645
BAG2 BCL2-associated athanogene 2 0.308867
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 0.304399
RBBP9 retinoblastoma binding protein 9 0.294378
MYL12B myosin, light chain 12B, regulatory 0.292897
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) 0.288829
MYOZ1 myozenin 1 0.28846
PMP2 peripheral myelin protein 2 0.288091
UBE2V2 ubiquitin-conjugating enzyme E2 variant 2 0.284769
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.277774
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 0.275569
FHL1 four and a half LIM domains 1 0.275202
SCG3 secretogranin III 0.271167
VCL vinculin 0.269335
PREB prolactin regulatory element binding 0.26385
SHC2 SHC (Src homology 2 domain containing) transforming protein 2 0.261296
FLNC filamin C, gamma 0.259837
SIGLEC10 sialic acid binding Ig-like lectin 10 0.258381
CA3 carbonic anhydrase III 0.244601
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) 0.244601
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase 0.235966
CD47 CD47 molecule 0.233459
TRIP6 thyroid hormone receptor interactor 6 0.230601
GRB10 growth factor receptor-bound protein 10 0.225622
NKX2-5 NK2 homeobox 5 0.216111
EP400 E1A binding protein p400 0.215761
NEBL nebulette 0.214366
PGLYRP1 peptidoglycan recognition protein 1 0.20574
GRAP2 GRB2-related adaptor protein 2 0.203361
BCHE butyrylcholinesterase 0.202346
RAB35 RAB35, member RAS oncogene family 0.200328
PKN1 protein kinase N1 0.198658
DNAH8 dynein, axonemal, heavy chain 8 0.197993
E2F3 E2F transcription factor 3 0.196339
BAG1 BCL2-associated athanogene 0.194698
PITX2 paired-like homeodomain 2 0.187646
HAX1 HCLS1 associated protein X-1 0.185469
MEF2D myocyte enhancer factor 2D 0.184547
YIPF1 Yip1 domain family, member 1 0.183025
CKMT1A creatine kinase, mitochondrial 1A 0.183025
TMOD1 tropomodulin 1 0.176305
PGAM2 phosphoglycerate mutase 2 (muscle) 0.170888
MYL1 myosin, light chain 1, alkali; skeletal, fast 0.166643
LBP lipopolysaccharide binding protein 0.160863
PGK1 phosphoglycerate kinase 1 0.160254