learning disability Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
Description A specific developmental disorder that involves difficulty in scholastic skills such as reading, writing, spelling, reasoning, recalling and/or organizing information resulting from the brain's inability to receive and process information. (Human Disease Ontology, DOID_8927)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:8927
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Genes

126 genes associated with the disease learning disability in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
ZNF512 zinc finger protein 512 0.801304
MMP7 matrix metallopeptidase 7 0.668836
SAMD3 sterile alpha motif domain containing 3 0.659337
CHN2 chimerin 2 0.577041
GRIK1 glutamate receptor, ionotropic, kainate 1 0.550393
DNAH5 dynein, axonemal, heavy chain 5 0.510061
MYO18B myosin XVIIIB 0.500649
SGCZ sarcoglycan, zeta 0.487141
PCSK6 proprotein convertase subtilisin/kexin type 6 0.477896
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 0.448296
COL4A2 collagen, type IV, alpha 2 0.441821
DAZAP1 DAZ associated protein 1 0.438494
ZFYVE28 zinc finger, FYVE domain containing 28 0.430906
SLC9C2 solute carrier family 9, member C2 (putative) 0.429365
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.429365
GPC3 glypican 3 0.428946
CDK1 cyclin-dependent kinase 1 0.425585
PRKCH protein kinase C, eta 0.425585
FBXL18 F-box and leucine-rich repeat protein 18 0.422054
MNS1 meiosis-specific nuclear structural 1 0.422054
CIDEC cell death-inducing DFFA-like effector c 0.420617
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein 0.419335
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) 0.415106
ALOX5AP arachidonate 5-lipoxygenase-activating protein 0.414949
FAM155A family with sequence similarity 155, member A 0.414949
NLRP3 NLR family, pyrin domain containing 3 0.413127
UBL3 ubiquitin-like 3 0.413127
PAMR1 peptidase domain containing associated with muscle regeneration 1 0.411526
VGLL4 vestigial-like family member 4 0.411526
ATXN10 ataxin 10 0.411081
TEX9 testis expressed 9 0.410836
OBP2A odorant binding protein 2A 0.407725
STAP1 signal transducing adaptor family member 1 0.407594
SLC39A8 solute carrier family 39 (zinc transporter), member 8 0.407465
ADAMTSL1 ADAMTS-like 1 0.407209
CERK ceramide kinase 0.406834
KIAA0196 KIAA0196 0.406111
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 0.405994
OXR1 oxidation resistance 1 0.405762
CCDC102B coiled-coil domain containing 102B 0.405647
ELP4 elongator acetyltransferase complex subunit 4 0.405198
FAM126A family with sequence similarity 126, member A 0.404869
RCAN3 RCAN family member 3 0.404129
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.404129
GABPB1 GA binding protein transcription factor, beta subunit 1 0.403924
PIAS4 protein inhibitor of activated STAT, 4 0.403823
CAMTA1 calmodulin binding transcription activator 1 0.402198
NT5C3A 5'-nucleotidase, cytosolic IIIA 0.401577
PTPRM protein tyrosine phosphatase, receptor type, M 0.401319
TKT transketolase 0.401234
CRBN cereblon 0.400981
PREP prolyl endopeptidase 0.400898
HNF1A HNF1 homeobox A 0.39955
SPATA13 spermatogenesis associated 13 0.3994
COX7B2 cytochrome c oxidase subunit VIIb2 0.398812
HHLA2 HERV-H LTR-associating 2 0.39874
NUAK1 NUAK family, SNF1-like kinase, 1 0.398526
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.398456
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 0.397903
RNF13 ring finger protein 13 0.397502
ZNF385B zinc finger protein 385B 0.397112
CLSTN2 calsyntenin 2 0.396038
ZNF385D zinc finger protein 385D 0.395967
DPYSL3 dihydropyrimidinase-like 3 0.395757
FAM19A1 family with sequence similarity 19 (chemokine (C-C motif)-like), member A1 0.39555
ABCA13 ATP-binding cassette, sub-family A (ABC1), member 13 0.39481
CDH8 cadherin 8, type 2 0.394292
TP63 tumor protein p63 0.393789
GRK5 G protein-coupled receptor kinase 5 0.393061
LRPPRC leucine-rich pentatricopeptide repeat containing 0.39265
KCNT2 potassium channel, sodium activated subfamily T, member 2 0.39208
FAM49B family with sequence similarity 49, member B 0.391474
E2F8 E2F transcription factor 8 0.390734
RAMP3 receptor (G protein-coupled) activity modifying protein 3 0.390375
ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 0.390024
TACR1 tachykinin receptor 1 0.389201
OTOF otoferlin 0.389153
C2ORF70 chromosome 2 open reading frame 70 0.387622
MEGF6 multiple EGF-like-domains 6 0.387324
CLPTM1 cleft lip and palate associated transmembrane protein 1 0.387281
FHOD3 formin homology 2 domain containing 3 0.386701
RAB11FIP4 RAB11 family interacting protein 4 (class II) 0.38662
CNTNAP2 contactin associated protein-like 2 0.38537
PSPH phosphoserine phosphatase 0.385109
THSD4 thrombospondin, type I, domain containing 4 0.385035
RPA1 replication protein A1, 70kDa 0.384598
ADGB androglobin 0.381932
TMEM87B transmembrane protein 87B 0.381086
FOXP1 forkhead box P1 0.3805
GRID2 glutamate receptor, ionotropic, delta 2 0.380183
MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1 0.379262
PRKCB protein kinase C, beta 0.378386
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.376802
CCDC82 coiled-coil domain containing 82 0.376724
CNTN5 contactin 5 0.375588
SHISA9 shisa family member 9 0.375225
UGT2B4 UDP glucuronosyltransferase 2 family, polypeptide B4 0.374199
FILIP1 filamin A interacting protein 1 0.372617
TRPA1 transient receptor potential cation channel, subfamily A, member 1 0.372472
ARHGEF16 Rho guanine nucleotide exchange factor (GEF) 16 0.37239
CENPC centromere protein C 0.372247
LILRP2 leukocyte immunoglobulin-like receptor pseudogene 2 0.371984
GJA1 gap junction protein, alpha 1, 43kDa 0.371374
GTPBP10 GTP-binding protein 10 (putative) 0.371354
LTBP1 latent transforming growth factor beta binding protein 1 0.371335
HCRTR1 hypocretin (orexin) receptor 1 0.371143
CERS6 ceramide synthase 6 0.36998
WWOX WW domain containing oxidoreductase 0.361104
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit 0.357582
CSE1L CSE1 chromosome segregation 1-like (yeast) 0.353425
DCDC2 doublecortin domain containing 2 0.351093
MGMT O-6-methylguanine-DNA methyltransferase 0.345865
EFCAB2 EF-hand calcium binding domain 2 0.34435
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) 0.340173
RYR3 ryanodine receptor 3 0.339583
SEMA6D sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 0.337413
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.335564
ANXA10 annexin A10 0.334608
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive) 0.334103
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.333814
ZFP28 ZFP28 zinc finger protein 0.333326
SLC30A8 solute carrier family 30 (zinc transporter), member 8 0.332342
DPYD dihydropyrimidine dehydrogenase 0.331772
RNF182 ring finger protein 182 0.330673
LDLRAD4 low density lipoprotein receptor class A domain containing 4 0.326748
DGKH diacylglycerol kinase, eta 0.323331