laminin-5 complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A laminin complex composed of alpha3, beta3 and gamma2 polypeptide chains. (Gene Ontology, GO_0005610)
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Genes

141 proteins co-occuring with the laminin-5 complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
LAMB3 laminin, beta 3 2.94081
LAMC2 laminin, gamma 2 2.53629
COL17A1 collagen, type XVII, alpha 1 2.22316
COL7A1 collagen, type VII, alpha 1 2.16613
LAMB2 laminin, beta 2 (laminin S) 2.02276
LAMA3 laminin, alpha 3 1.69583
ITGA6 integrin, alpha 6 1.50904
ITGB4 integrin, beta 4 1.4921
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 1.39183
FN1 fibronectin 1 1.30981
NID1 nidogen 1 1.2889
MMP2 matrix metallopeptidase 2 1.11072
MMP7 matrix metallopeptidase 7 1.09136
TNC tenascin C 0.966956
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.957831
BMP1 bone morphogenetic protein 1 0.954483
WARS tryptophanyl-tRNA synthetase 0.950189
KRT14 keratin 14, type I 0.912511
THAP2 THAP domain containing, apoptosis associated protein 2 0.905996
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.902745
MMP1 matrix metallopeptidase 1 0.876869
LAMA5 laminin, alpha 5 0.86169
CD151 CD151 molecule (Raph blood group) 0.838269
CD79A CD79a molecule, immunoglobulin-associated alpha 0.835056
MMP19 matrix metallopeptidase 19 0.822206
FLG filaggrin 0.812111
MMP9 matrix metallopeptidase 9 0.809817
MMP10 matrix metallopeptidase 10 0.753623
IVL involucrin 0.720797
KRT5 keratin 5, type II 0.712351
KRT3 keratin 3, type II 0.707482
EGFR epidermal growth factor receptor 0.707482
PHYH phytanoyl-CoA 2-hydroxylase 0.692955
DST dystonin 0.690764
DSG3 desmoglein 3 0.68508
KRT13 keratin 13, type I 0.679849
LAMA4 laminin, alpha 4 0.675934
MMP8 matrix metallopeptidase 8 0.651729
TLL1 tolloid-like 1 0.641001
KRT10 keratin 10, type I 0.628613
FGF7 fibroblast growth factor 7 0.62393
MMP3 matrix metallopeptidase 3 0.603174
MMP26 matrix metallopeptidase 26 0.590973
PCOLCE2 procollagen C-endopeptidase enhancer 2 0.587618
TGFB1 transforming growth factor, beta 1 0.587199
KRT12 keratin 12, type I 0.584686
LAD1 ladinin 1 0.567169
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.563017
TMSB4X thymosin beta 4, X-linked 0.555145
SDC1 syndecan 1 0.521432
TLL2 tolloid-like 2 0.521432
MMP13 matrix metallopeptidase 13 0.514085
DSG1 desmoglein 1 0.50107
FBN1 fibrillin 1 0.499853
TIMP2 TIMP metallopeptidase inhibitor 2 0.490135
ECM1 extracellular matrix protein 1 0.473215
ITGB7 integrin, beta 7 0.471208
ITGB6 integrin, beta 6 0.470406
ITGB8 integrin, beta 8 0.470406
DSC1 desmocollin 1 0.468802
EBAG9 estrogen receptor binding site associated, antigen, 9 0.468401
CD44 CD44 molecule (Indian blood group) 0.4672
MGAT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase 0.463598
CD9 CD9 molecule 0.461599
AMTN amelotin 0.448054
PKP1 plakophilin 1 0.447656
SFN stratifin 0.438146
LYPD3 LY6/PLAUR domain containing 3 0.43538
MMP12 matrix metallopeptidase 12 0.425138
AQP5 aquaporin 5 0.42396
FSCN3 fascin actin-bundling protein 3, testicular 0.423174
MIR100 microRNA 100 0.422389
CD81 CD81 molecule 0.420036
FSCN2 fascin actin-bundling protein 2, retinal 0.409089
TIMP1 TIMP metallopeptidase inhibitor 1 0.409089
CNTN4 contactin 4 0.399751
EPHA2 EPH receptor A2 0.399363
ERBB2 erb-b2 receptor tyrosine kinase 2 0.398199
GJA1 gap junction protein, alpha 1, 43kDa 0.38428
PLEC plectin 0.375434
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.373132
SEBOX SEBOX homeobox 0.368536
TOX4 TOX high mobility group box family member 4 0.368153
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 0.36204
MET MET proto-oncogene, receptor tyrosine kinase 0.359371
MED10 mediator complex subunit 10 0.355563
FBLN2 fibulin 2 0.351762
BHLHE23 basic helix-loop-helix family, member e23 0.343421
ZNF135 zinc finger protein 135 0.340017
MIRLET7C microRNA let-7c 0.328332
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.320451
NDUFC2 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 0.315212
TIMP3 TIMP metallopeptidase inhibitor 3 0.312971
IL12RB2 interleukin 12 receptor, beta 2 0.311851
ASB14 ankyrin repeat and SOCS box containing 14 0.30924
HGF hepatocyte growth factor (hepapoietin A; scatter factor) 0.29586
TM4SF5 transmembrane 4 L six family member 5 0.285507
KRT1 keratin 1, type II 0.274835
AMELX amelogenin, X-linked 0.271533
SDC4 syndecan 4 0.268603
SFTPC surfactant protein C 0.266774
AMELY amelogenin, Y-linked 0.264946
FSCN1 fascin actin-bundling protein 1 0.263485
LOR loricrin 0.262025
CDKN2A cyclin-dependent kinase inhibitor 2A 0.259837
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.254017
LAMB1 laminin, beta 1 0.251476
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) 0.24894
GDF11 growth differentiation factor 11 0.243519
MSX1 msh homeobox 1 0.243158
BHLHE22 basic helix-loop-helix family, member e22 0.242437
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.240996
PLG plasminogen 0.240996
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.239197
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.234533
SHC3 SHC (Src homology 2 domain containing) transforming protein 3 0.230601
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 0.230245
TSPAN8 tetraspanin 8 0.229176
DSP desmoplakin 0.226331
CHRD chordin 0.225267
TP53 tumor protein p53 0.224204
IL1B interleukin 1, beta 0.219265
CDC42 cell division cycle 42 0.215412
SHH sonic hedgehog 0.210203
VEGFC vascular endothelial growth factor C 0.205399
LAMA2 laminin, alpha 2 0.203699
MSX2 msh homeobox 2 0.202346
CD82 CD82 molecule 0.201335
CST3 cystatin C 0.189857
SLC22A2 solute carrier family 22 (organic cation transporter), member 2 0.186708
SRRM1 serine/arginine repetitive matrix 1 0.184547
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.184241
RUNX2 runt-related transcription factor 2 0.178299
LGALS7B lectin, galactoside-binding, soluble, 7B 0.174087
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.173543
PLAU plasminogen activator, urokinase 0.171673
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.170888
HRAS Harvey rat sarcoma viral oncogene homolog 0.166884
ITGAV integrin, alpha V 0.164315
GMNN geminin, DNA replication inhibitor 0.161693
CTSS cathepsin S 0.156863