laminin complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha, beta and gamma. Provides an integral part of the structural scaffolding of basement membranes. (Gene Ontology, GO_0043256)
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Genes

260 proteins co-occuring with the laminin complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
LAMB2 laminin, beta 2 (laminin S) 2.8274
LAMB3 laminin, beta 3 2.66648
LAMC2 laminin, gamma 2 2.28925
NID1 nidogen 1 2.04667
COL7A1 collagen, type VII, alpha 1 2.04377
COL17A1 collagen, type XVII, alpha 1 2.00693
FN1 fibronectin 1 1.80573
LAMA4 laminin, alpha 4 1.6684
ITGA6 integrin, alpha 6 1.6036
LAMA3 laminin, alpha 3 1.52202
PHYH phytanoyl-CoA 2-hydroxylase 1.51751
ITGB4 integrin, beta 4 1.4757
LAMA1 laminin, alpha 1 1.474
LAMA5 laminin, alpha 5 1.4559
LAMA2 laminin, alpha 2 1.37078
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 1.36088
TNC tenascin C 1.33957
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 1.33902
NID2 nidogen 2 (osteonidogen) 1.21583
MMP2 matrix metallopeptidase 2 1.18184
FBLN1 fibulin 1 1.11276
FBLN2 fibulin 2 1.10715
MMP7 matrix metallopeptidase 7 1.05791
LAMB1 laminin, beta 1 1.05488
CD151 CD151 molecule (Raph blood group) 1.01585
ITGA7 integrin, alpha 7 1.01536
BCAM basal cell adhesion molecule (Lutheran blood group) 0.981473
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.957352
SEBOX SEBOX homeobox 0.945432
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.940215
RPSA ribosomal protein SA 0.940215
MMP9 matrix metallopeptidase 9 0.939269
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.897183
CD44 CD44 molecule (Indian blood group) 0.86123
MMP1 matrix metallopeptidase 1 0.855717
LGALS3 lectin, galactoside-binding, soluble, 3 0.838728
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.83322
TINAGL1 tubulointerstitial nephritis antigen-like 1 0.830925
BMP1 bone morphogenetic protein 1 0.816699
WARS tryptophanyl-tRNA synthetase 0.81257
KRT14 keratin 14, type I 0.811193
MMP19 matrix metallopeptidase 19 0.807524
MMP10 matrix metallopeptidase 10 0.799728
THAP2 THAP domain containing, apoptosis associated protein 2 0.769539
FLG filaggrin 0.723472
CD79A CD79a molecule, immunoglobulin-associated alpha 0.71857
IVL involucrin 0.715458
ECM1 extracellular matrix protein 1 0.708366
FBN1 fibrillin 1 0.689451
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.687264
PINX1 PIN2/TERF1 interacting, telomerase inhibitor 1 0.683771
OCIAD1 OCIA domain containing 1 0.660345
KRT5 keratin 5, type II 0.630318
FGF7 fibroblast growth factor 7 0.628187
EGFR epidermal growth factor receptor 0.624781
ITGB8 integrin, beta 8 0.617982
MMP3 matrix metallopeptidase 3 0.609932
TGFB1 transforming growth factor, beta 1 0.596435
CD9 CD9 molecule 0.593912
MMP8 matrix metallopeptidase 8 0.590133
KRT3 keratin 3, type II 0.580086
KRT10 keratin 10, type I 0.579669
MRPS21 mitochondrial ribosomal protein S21 0.573828
TIMP2 TIMP metallopeptidase inhibitor 2 0.573411
DST dystonin 0.570496
SDC1 syndecan 1 0.565508
DSG3 desmoglein 3 0.558871
KRT13 keratin 13, type I 0.553905
ITGB7 integrin, beta 7 0.544411
ITGA1 integrin, alpha 1 0.543587
ITGB6 integrin, beta 6 0.543587
FDCSP follicular dendritic cell secreted protein 0.537416
TLL1 tolloid-like 1 0.51694
PXN paxillin 0.499447
GPC1 glypican 1 0.497015
DSG1 desmoglein 1 0.475223
SDC4 syndecan 4 0.470807
MMP26 matrix metallopeptidase 26 0.469203
PCOLCE2 procollagen C-endopeptidase enhancer 2 0.465998
KRT12 keratin 12, type I 0.463198
THBS1 thrombospondin 1 0.458006
MMP13 matrix metallopeptidase 13 0.450836
LAD1 ladinin 1 0.446465
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.43538
TMSB4X thymosin beta 4, X-linked 0.434985
TIMP1 TIMP metallopeptidase inhibitor 1 0.433407
CTSF cathepsin F 0.433407
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 0.431829
EPSTI1 epithelial stromal interaction 1 (breast) 0.426711
ERBB2 erb-b2 receptor tyrosine kinase 2 0.426711
LACRT lacritin 0.41886
TIMP3 TIMP metallopeptidase inhibitor 3 0.416511
FSCN3 fascin actin-bundling protein 3, testicular 0.414164
DCN decorin 0.405971
TLL2 tolloid-like 2 0.402859
FSCN2 fascin actin-bundling protein 2, retinal 0.400139
PLAU plasminogen activator, urokinase 0.397423
SDC2 syndecan 2 0.395098
CD81 CD81 molecule 0.389296
MET MET proto-oncogene, receptor tyrosine kinase 0.388523
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.368153
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.366623
PLG plasminogen 0.362804
DSC1 desmocollin 1 0.352901
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.352901
EBAG9 estrogen receptor binding site associated, antigen, 9 0.352522
CDC42 cell division cycle 42 0.348346
MGAT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase 0.347587
SOX17 SRY (sex determining region Y)-box 17 0.341907
FSCN1 fascin actin-bundling protein 1 0.337373
PBK PDZ binding kinase 0.33511
AMTN amelotin 0.333225
PKP1 plakophilin 1 0.332848
PRAMEF12 PRAME family member 12 0.329461
NTN1 netrin 1 0.325702
VCL vinculin 0.325327
SFN stratifin 0.323825
ODAM odontogenic, ameloblast asssociated 0.323825
LYPD3 LY6/PLAUR domain containing 3 0.321201
GJA1 gap junction protein, alpha 1, 43kDa 0.320451
REG3A regenerating islet-derived 3 alpha 0.319328
GATA6 GATA binding protein 6 0.316708
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.315212
RUNX2 runt-related transcription factor 2 0.314091
MMP12 matrix metallopeptidase 12 0.311478
COL4A1 collagen, type IV, alpha 1 0.311478
AQP5 aquaporin 5 0.310358
MIR100 microRNA 100 0.308867
IL1B interleukin 1, beta 0.307377
SDK1 sidekick cell adhesion molecule 1 0.301054
FGF2 fibroblast growth factor 2 (basic) 0.297713
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 0.29586
SLC25A29 solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 0.287721
CNTN4 contactin 4 0.287352
EPHA2 EPH receptor A2 0.286614
AMELX amelogenin, X-linked 0.285138
PDE8A phosphodiesterase 8A 0.282189
SHH sonic hedgehog 0.279245
AMELY amelogenin, Y-linked 0.278509
GPC2 glypican 2 0.272267
CD82 CD82 molecule 0.270068
CDH5 cadherin 5, type 2 (vascular endothelium) 0.267139
PLEC plectin 0.264215
TOX4 TOX high mobility group box family member 4 0.257289
HOXD3 homeobox D3 0.256197
JUN jun proto-oncogene 0.254017
MED10 mediator complex subunit 10 0.245323
KRT8 keratin 8, type II 0.242797
BHLHE23 basic helix-loop-helix family, member e23 0.233817
ZNF135 zinc finger protein 135 0.230601
INS insulin 0.229176
TIE1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 0.227041
HRAS Harvey rat sarcoma viral oncogene homolog 0.224913
VEGFA vascular endothelial growth factor A 0.224913
ITGAV integrin, alpha V 0.224204
UTRN utrophin 0.222083
MIRLET7C microRNA let-7c 0.219617
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.214366
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.21228
CST3 cystatin C 0.210894
NGF nerve growth factor (beta polypeptide) 0.207451
NDUFC2 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 0.207451
IL12RB2 interleukin 12 receptor, beta 2 0.204039
LOX lysyl oxidase 0.203699
ASB14 ankyrin repeat and SOCS box containing 14 0.202009
BGLAP bone gamma-carboxyglutamate (gla) protein 0.198658
LRPAP1 low density lipoprotein receptor-related protein associated protein 1 0.198658
ADAT2 adenosine deaminase, tRNA-specific 2 0.196999
HGF hepatocyte growth factor (hepapoietin A; scatter factor) 0.190175
TAC3 tachykinin 3 0.18859
ACHE acetylcholinesterase (Yt blood group) 0.186087
TM4SF5 transmembrane 4 L six family member 5 0.181524
TP53 tumor protein p53 0.180634
FYN FYN proto-oncogene, Src family tyrosine kinase 0.178299
QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 0.177154
ATR ATR serine/threonine kinase 0.173543
KRT1 keratin 1, type II 0.173273
HBA1 hemoglobin, alpha 1 0.169604
BTC betacellulin 0.168598
SFTPC surfactant protein C 0.167611
HBA2 hemoglobin, alpha 2 0.165932
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.164542
LOR loricrin 0.164542
JAG1 jagged 1 0.164089
RRAS related RAS viral (r-ras) oncogene homolog 0.16342
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 0.16342
CDKN2A cyclin-dependent kinase inhibitor 2A 0.1632
SMAD2 SMAD family member 2 0.161484
PLAT plasminogen activator, tissue 0.160053
MATN2 matrilin 2 0.159856
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.159856
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.158129
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) 0.157218
SOX10 SRY (sex determining region Y)-box 10 0.156342
RFXANK regulatory factor X-associated ankyrin-containing protein 0.133577
PTPRO protein tyrosine phosphatase, receptor type, O 0.130173
GLIS2 GLIS family zinc finger 2 0.12774
MUSK muscle, skeletal, receptor tyrosine kinase 0.124472
IGFBP5 insulin-like growth factor binding protein 5 0.113302
LMNB1 lamin B1 0.106913
DMD dystrophin 0.106812
SLN sarcolipin 0.105606
FGF3 fibroblast growth factor 3 0.104854
VCAN versican 0.104195
BAG1 BCL2-associated athanogene 0.103251
NPHS1 nephrosis 1, congenital, Finnish type (nephrin) 0.099299
COL4A5 collagen, type IV, alpha 5 0.098376
TFRC transferrin receptor 0.097006
MAPK14 mitogen-activated protein kinase 14 0.093398
DOCK1 dedicator of cytokinesis 1 0.092441
CD163 CD163 molecule 0.089349
IGHV3-30 immunoglobulin heavy variable 3-30 0.089103
ENO1 enolase 1, (alpha) 0.088482
SI sucrase-isomaltase (alpha-glucosidase) 0.08817
CITED1 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 0.087541
GNPDA1 glucosamine-6-phosphate deaminase 1 0.087097
MRPL49 mitochondrial ribosomal protein L49 0.086907
GDF11 growth differentiation factor 11 0.086394
MSX1 msh homeobox 1 0.086362
KCNJ10 potassium channel, inwardly rectifying subfamily J, member 10 0.086298
BHLHE22 basic helix-loop-helix family, member e22 0.086298
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 0.086265
MCM8 minichromosome maintenance complex component 8 0.086233
B4GALT6 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 0.08604
NCL nucleolin 0.086008
TNS1 tensin 1 0.085848
SHC3 SHC (Src homology 2 domain containing) transforming protein 3 0.08523
TSPAN8 tetraspanin 8 0.0851
FBN2 fibrillin 2 0.084937
DSP desmoplakin 0.084839
CXCL14 chemokine (C-X-C motif) ligand 14 0.084807
CHRD chordin 0.084741
SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group) 0.083851
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.083387
VEGFC vascular endothelial growth factor C 0.082852
VPREB1 pre-B lymphocyte 1 0.082551
MSX2 msh homeobox 2 0.082551
GATA4 GATA binding protein 4 0.082518
FGF4 fibroblast growth factor 4 0.081977
BMP6 bone morphogenetic protein 6 0.081198
SLC22A2 solute carrier family 22 (organic cation transporter), member 2 0.080924
STYK1 serine/threonine/tyrosine kinase 1 0.080684
SRRM1 serine/arginine repetitive matrix 1 0.080684
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.08065
B3GAT1 beta-1,3-glucuronyltransferase 1 0.080102
FAP fibroblast activation protein, alpha 0.080102
MS4A1 membrane-spanning 4-domains, subfamily A, member 1 0.080102
SCGB1D1 secretoglobin, family 1D, member 1 0.079894
LGALS7B lectin, galactoside-binding, soluble, 7B 0.079444
EREG epiregulin 0.079375
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.079375
MED28 mediator complex subunit 28 0.079099
FGFR3 fibroblast growth factor receptor 3 0.078924
MMP16 matrix metallopeptidase 16 (membrane-inserted) 0.078749
SMC3 structural maintenance of chromosomes 3 0.07854
MMP20 matrix metallopeptidase 20 0.07819
EDA ectodysplasin A 0.077699
GMNN geminin, DNA replication inhibitor 0.077664
ACTN4 actinin, alpha 4 0.077382
CTSS cathepsin S 0.076782