laminated body Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Inclusion body characterized by regularly spaced sheets of tubules arranged in a whorl pattern resembling a fingerprint. Laminated bodies have been observed in neurons of the lateral geniculate nucleus. (Gene Ontology, GO_1990011)
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Genes

75 proteins co-occuring with the laminated body cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
DCLK3 doublecortin-like kinase 3 1.67933
CDC14A cell division cycle 14A 1.37907
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 1.18748
KEL Kell blood group, metallo-endopeptidase 1.10817
CDC34 cell division cycle 34 0.984393
HAND1 heart and neural crest derivatives expressed 1 0.888397
BRSK2 BR serine/threonine kinase 2 0.878712
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.858014
CDC14B cell division cycle 14B 0.843778
CLTB clathrin, light chain B 0.826336
GREM2 gremlin 2, DAN family BMP antagonist 0.8089
CDK1 cyclin-dependent kinase 1 0.793313
SELPLG selectin P ligand 0.772732
CDC20 cell division cycle 20 0.771819
NIM1K NIM1 serine/threonine protein kinase 0.769083
CDC6 cell division cycle 6 0.766804
RIC3 RIC3 acetylcholine receptor chaperone 0.719906
BEST1 bestrophin 1 0.71768
GSTZ1 glutathione S-transferase zeta 1 0.703949
PDXP pyridoxal (pyridoxine, vitamin B6) phosphatase 0.662072
BCO1 beta-carotene oxygenase 1 0.642715
HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 0.633732
POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) 0.593072
GPR15 G protein-coupled receptor 15 0.58678
PIM1 Pim-1 proto-oncogene, serine/threonine kinase 0.581758
UBE2H ubiquitin-conjugating enzyme E2H 0.575495
ATR ATR serine/threonine kinase 0.553905
REM1 RAS (RAD and GEM)-like GTP-binding 1 0.52675
CFL2 cofilin 2 (muscle) 0.482064
C19ORF48 chromosome 19 open reading frame 48 0.474018
PLK1 polo-like kinase 1 0.454019
IGBP1 immunoglobulin (CD79A) binding protein 1 0.448848
FLI1 Fli-1 proto-oncogene, ETS transcription factor 0.427497
CAPN1 calpain 1, (mu/I) large subunit 0.404026
MCM5 minichromosome maintenance complex component 5 0.398975
S100G S100 calcium binding protein G 0.390068
NRL neural retina leucine zipper 0.387365
OXT oxytocin/neurophysin I prepropeptide 0.368536
TCN2 transcobalamin II 0.367771
C1R complement component 1, r subcomponent 0.358609
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.348346
BCL3 B-cell CLL/lymphoma 3 0.342285
FGR FGR proto-oncogene, Src family tyrosine kinase 0.341529
DBF4 DBF4 zinc finger 0.338506
SEPT5 septin 5 0.335864
MOGS mannosyl-oligosaccharide glucosidase 0.326453
CP ceruloplasmin (ferroxidase) 0.319328
HAVCR1 hepatitis A virus cellular receptor 1 0.309986
POMC proopiomelanocortin 0.300311
WEE1 WEE1 G2 checkpoint kinase 0.291047
LOX lysyl oxidase 0.284032
RANBP1 RAN binding protein 1 0.283663
CHKA choline kinase alpha 0.274835
F2 coagulation factor II (thrombin) 0.237401
PPP2R4 protein phosphatase 2A activator, regulatory subunit 4 0.236683
LYZ lysozyme 0.222436
TRIM37 tripartite motif containing 37 0.220673
LIG3 ligase III, DNA, ATP-dependent 0.21716
CDT1 chromatin licensing and DNA replication factor 1 0.214366
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.211587
PPT1 palmitoyl-protein thioesterase 1 0.208137
NME1-NME2 NME1-NME2 readthrough 0.203361
HK2 hexokinase 2 0.195025
CD1D CD1d molecule 0.192746
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.187646
ALB albumin 0.186708
SPTA1 spectrin, alpha, erythrocytic 1 0.178299
ESPL1 extra spindle pole bodies homolog 1 (S. cerevisiae) 0.167125
FXN frataxin 0.163641
GGT2 gamma-glutamyltransferase 2 0.162546
AKAP13 A kinase (PRKA) anchor protein 13 0.160254
HEXA hexosaminidase A (alpha polypeptide) 0.159658
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 0.158882
MUT methylmalonyl CoA mutase 0.136892
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.135879