lamina lucida Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The electron-lucent layer of the basal lamina adjacent to the basal plasma membrane of the cells that rest on the lamina. (Gene Ontology, GO_0008002)
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Genes

51 proteins co-occuring with the lamina lucida cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
COL17A1 collagen, type XVII, alpha 1 2.09765
LAMB3 laminin, beta 3 1.83067
COL7A1 collagen, type VII, alpha 1 1.81243
LAMC2 laminin, gamma 2 1.77209
CD79A CD79a molecule, immunoglobulin-associated alpha 1.64493
UBL7 ubiquitin-like 7 1.24288
NID1 nidogen 1 1.1726
LAMA3 laminin, alpha 3 1.11582
MED10 mediator complex subunit 10 1.07055
FN1 fibronectin 1 1.01536
CD44 CD44 molecule (Indian blood group) 0.97565
MAMDC4 MAM domain containing 4 0.96792
ITGA6 integrin, alpha 6 0.792854
TYMP thymidine phosphorylase 0.716346
ITGB4 integrin, beta 4 0.68508
LAMA2 laminin, alpha 2 0.625206
RARA retinoic acid receptor, alpha 0.599381
BHLHE40 basic helix-loop-helix family, member e40 0.544823
GPR83 G protein-coupled receptor 83 0.504724
LAMB2 laminin, beta 2 (laminin S) 0.41221
EPAS1 endothelial PAS domain protein 1 0.391228
NID2 nidogen 2 (osteonidogen) 0.383895
COL14A1 collagen, type XIV, alpha 1 0.380045
KRT1 keratin 1, type II 0.369301
BCAM basal cell adhesion molecule (Lutheran blood group) 0.360133
PLEC plectin 0.344178
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.319702
C3 complement component 3 0.308867
FBLN2 fibulin 2 0.306632
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 0.290678
SACS sacsin molecular chaperone 0.275936
FTL ferritin, light polypeptide 0.273
FTH1 ferritin, heavy polypeptide 1 0.271167
CD1B CD1b molecule 0.25438
RAPGEF1 Rap guanine nucleotide exchange factor (GEF) 1 0.246769
KRT9 keratin 9, type I 0.232029
SDC2 syndecan 2 0.229176
TP63 tumor protein p63 0.21716
FGF10 fibroblast growth factor 10 0.214366
KRT14 keratin 14, type I 0.210549
IVL involucrin 0.207108
KRT5 keratin 5, type II 0.198325
MMP25 matrix metallopeptidase 25 0.195025
HBA1 hemoglobin, alpha 1 0.172735
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 0.169604
HBA2 hemoglobin, alpha 2 0.168847
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.167366
CKAP5 cytoskeleton associated protein 5 0.166643
ITGB7 integrin, beta 7 0.157039
ITGB8 integrin, beta 8 0.156863
ITGB6 integrin, beta 6 0.156688