intermediate-density lipoprotein particle Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A triglyceride-rich lipoprotein particle that typically contains APOB100, APOE and APOCs and has a density of 1.006-1.019 g/ml and a diameter of between 25-30 nm. IDL particles are found in blood and are formed by the delipidation of very-low-density lipoprotein particles (VLDL). IDL particles are removed from blood by the liver, following binding to the APOE receptor, or are converted to low-density lipoprotein (LDL). (Gene Ontology, GO_0034363)
Similar Terms
Downloads & Tools

Genes

83 proteins co-occuring with the intermediate-density lipoprotein particle cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
APOB apolipoprotein B 3.09589
APOE apolipoprotein E 2.38614
MYDGF myeloid-derived growth factor 2.14569
LPL lipoprotein lipase 2.11439
APOC3 apolipoprotein C-III 2.04231
LPA lipoprotein, Lp(a) 1.96075
CETP cholesteryl ester transfer protein, plasma 1.74003
LCAT lecithin-cholesterol acyltransferase 1.69338
LIPC lipase, hepatic 1.67447
COG2 component of oligomeric golgi complex 2 1.57416
APOA1 apolipoprotein A-I 1.50001
APOA2 apolipoprotein A-II 1.4757
COG1 component of oligomeric golgi complex 1 1.19777
LDLR low density lipoprotein receptor 1.12756
PLTP phospholipid transfer protein 0.984393
INS insulin 0.952096
APOC1 apolipoprotein C-I 0.869966
USF1 upstream transcription factor 1 0.86077
CCDC92 coiled-coil domain containing 92 0.856176
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1 0.841941
ZNF664 zinc finger protein 664 0.735565
ALB albumin 0.69164
APOD apolipoprotein D 0.678108
APOC2 apolipoprotein C-II 0.677238
VLDLR very low density lipoprotein receptor 0.647003
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 0.645716
CRP C-reactive protein, pentraxin-related 0.640573
MTTP microsomal triglyceride transfer protein 0.63715
PLA2G7 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) 0.612048
DNAH10 dynein, axonemal, heavy chain 10 0.563017
PCSK7 proprotein convertase subtilisin/kexin type 7 0.562187
CSN1S1 casein alpha s1 0.521841
TTPA tocopherol (alpha) transfer protein 0.50107
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1 0.500258
PSAT1 phosphoserine aminotransferase 1 0.486904
LIPG lipase, endothelial 0.457606
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.45641
CEL carboxyl ester lipase 0.444878
JMJD1C jumonji domain containing 1C 0.440916
F7 coagulation factor VII (serum prothrombin conversion accelerator) 0.430253
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 0.419644
PRSS30P protease, serine, 30, pseudogene 0.413382
CD5 CD5 molecule 0.407529
APOA5 apolipoprotein A-V 0.402859
PEMT phosphatidylethanolamine N-methyltransferase 0.37505
STARD8 StAR-related lipid transfer (START) domain containing 8 0.364713
GET4 golgi to ER traffic protein 4 homolog (S. cerevisiae) 0.35899
BTNL2 butyrophilin-like 2 0.352901
SCARB1 scavenger receptor class B, member 1 0.352142
INSM2 insulinoma-associated 2 0.341151
SLC43A2 solute carrier family 43 (amino acid system L transporter), member 2 0.330589
WFDC2 WAP four-disulfide core domain 2 0.300311
SOAT1 sterol O-acyltransferase 1 0.294748
FBXO44 F-box protein 44 0.287352
IRF6 interferon regulatory factor 6 0.281453
DMBX1 diencephalon/mesencephalon homeobox 1 0.280716
SAA4 serum amyloid A4, constitutive 0.279612
PPARA peroxisome proliferator-activated receptor alpha 0.276671
FASN fatty acid synthase 0.275936
GMPR guanosine monophosphate reductase 0.266408
F12 coagulation factor XII (Hageman factor) 0.26385
PXDN peroxidasin 0.262025
SBF2 SET binding factor 2 0.260566
PCCB propionyl CoA carboxylase, beta polypeptide 0.251114
A1CF APOBEC1 complementation factor 0.248578
DLL1 delta-like 1 (Drosophila) 0.226686
SUGP1 SURP and G patch domain containing 1 0.226331
HES6 hes family bHLH transcription factor 6 0.195353
SPAG11A sperm associated antigen 11A 0.194045
UGT2B4 UDP glucuronosyltransferase 2 family, polypeptide B4 0.193719
SREBF1 sterol regulatory element binding transcription factor 1 0.193719
SOAT2 sterol O-acyltransferase 2 0.189222
MALL mal, T-cell differentiation protein-like 0.182723
MXD4 MAX dimerization protein 4 0.181823
MLXIPL MLX interacting protein-like 0.181227
PCSK9 proprotein convertase subtilisin/kexin type 9 0.176024
BLOC1S4 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino 0.174361
SPAG11B sperm associated antigen 11B 0.174087
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.173003
LYPLA1 lysophospholipase I 0.165
CXCL14 chemokine (C-X-C motif) ligand 14 0.164315
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2 0.163865
PNLIP pancreatic lipase 0.161484