ino80-type complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A chromatin remodeling protein complex initially purified from S. cerevisiae and containing more than 10 subunits, including the SWR1-related complexes. INO80 (inositol requiring 80)-type complexes have diverse functions, including promoting transcriptional activation and DNA repair. (Gene Ontology, GO_0097346)
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91 proteins co-occuring with the ino80-type complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
H2AFZ H2A histone family, member Z 1.43726
ACTR8 ARP8 actin-related protein 8 homolog (yeast) 1.28143
SRCAP Snf2-related CREBBP activator protein 1.2793
HIST2H2AA3 histone cluster 2, H2aa3 1.20086
HIST2H2AC histone cluster 2, H2ac 1.20086
HIST2H2AA4 histone cluster 2, H2aa4 1.20086
INO80C INO80 complex subunit C 1.06802
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 1.03879
RUVBL2 RuvB-like AAA ATPase 2 1.0253
YEATS4 YEATS domain containing 4 1.01486
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 0.977104
HIST1H2AJ histone cluster 1, H2aj 0.975166
HIST1H2AM histone cluster 1, H2am 0.975166
HIST1H2AD histone cluster 1, H2ad 0.975166
H2AFJ H2A histone family, member J 0.975166
HIST1H2AH histone cluster 1, H2ah 0.974682
HIST1H2AG histone cluster 1, H2ag 0.97323
H2AFY2 H2A histone family, member Y2 0.971297
HIST1H2AB histone cluster 1, H2ab 0.970331
HIST1H2AE histone cluster 1, H2ae 0.970331
H2AFV H2A histone family, member V 0.969848
H2AFB1 H2A histone family, member B1 0.966474
ACTR3B ARP3 actin-related protein 3 homolog B (yeast) 0.964549
H2AFB2 H2A histone family, member B2 0.962146
H2AFY H2A histone family, member Y 0.957831
EP400 E1A binding protein p400 0.898109
YY1 YY1 transcription factor 0.88286
NFRKB nuclear factor related to kappaB binding protein 0.799728
KAT5 K(lysine) acetyltransferase 5 0.690326
H2AFX H2A histone family, member X 0.678543
KAT8 K(lysine) acetyltransferase 8 0.60655
BAP1 BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) 0.605284
WDR5 WD repeat domain 5 0.601487
ZNF143 zinc finger protein 143 0.594332
NAP1L1 nucleosome assembly protein 1-like 1 0.584268
BATF basic leucine zipper transcription factor, ATF-like 0.517756
MCRS1 microspherule protein 1 0.490944
ADRM1 adhesion regulating molecule 1 0.483273
RAD54B RAD54 homolog B (S. cerevisiae) 0.462398
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae) 0.450438
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 0.435775
RAD21 RAD21 homolog (S. pombe) 0.417294
EML1 echinoderm microtubule associated protein like 1 0.392388
EGLN3 egl-9 family hypoxia-inducible factor 3 0.382739
CAND1 cullin-associated and neddylation-dissociated 1 0.372366
CAND2 cullin-associated and neddylation-dissociated 2 (putative) 0.371216
RPS5 ribosomal protein S5 0.342285
PIF1 PIF1 5'-to-3' DNA helicase 0.33511
ATR ATR serine/threonine kinase 0.332472
HCFC1 host cell factor C1 0.313718
HIST2H4B histone cluster 2, H4b 0.308494
HIST1H4A histone cluster 1, H4a 0.308494
HIST1H4B histone cluster 1, H4b 0.308494
HIST1H4F histone cluster 1, H4f 0.308494
HIST1H4E histone cluster 1, H4e 0.308494
HIST1H4D histone cluster 1, H4d 0.308494
HIST1H4C histone cluster 1, H4c 0.308494
HIST1H4K histone cluster 1, H4k 0.308494
HIST2H4A histone cluster 2, H4a 0.308494
HIST1H4J histone cluster 1, H4j 0.308494
HIST1H4H histone cluster 1, H4h 0.308494
HIST1H4I histone cluster 1, H4i 0.308494
HIST1H4L histone cluster 1, H4l 0.308122
HIST4H4 histone cluster 4, H4 0.308122
EBF1 early B-cell factor 1 0.29623
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.294378
CDC73 cell division cycle 73 0.271167
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.254017
ATF2 activating transcription factor 2 0.24894
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3 0.239557
IRF4 interferon regulatory factor 4 0.235607
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.202684
RAD18 RAD18 E3 ubiquitin protein ligase 0.202009
H3F3B H3 histone, family 3B (H3.3B) 0.199325
H3F3A H3 histone, family 3A 0.199325
SETD2 SET domain containing 2 0.171673
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 0.163865
FOXA2 forkhead box A2 0.16298
SETD1A SET domain containing 1A 0.134348
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila) 0.13279
PAX5 paired box 5 0.132731
SMC3 structural maintenance of chromosomes 3 0.13225
RAD51 RAD51 recombinase 0.132126
CENPC centromere protein C 0.132033
CCND2 cyclin D2 0.131843
XPC xeroderma pigmentosum, complementation group C 0.131682
ATP11A ATPase, class VI, type 11A 0.131353
ACTN4 actinin, alpha 4 0.130698
PCNA proliferating cell nuclear antigen 0.130228
BANF1 barrier to autointegration factor 1 0.129503
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.128057