inner chondrogenic layer of perichondrium Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description The perichondrium consists of two separate layers: an outer fibrous layer and inner chondrogenic layer. The chondrogenic layer remains undifferentiated and can form chondroblasts or chondrocytes. (BRENDA Tissue and Enzyme Source Ontology, BTO_0005090)
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Genes

228 proteins co-occuring with the tissue inner chondrogenic layer of perichondrium in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
SOX9 SRY (sex determining region Y)-box 9 2.06424
ACAN aggrecan 2.05033
COL2A1 collagen, type II, alpha 1 1.64757
COL10A1 collagen, type X, alpha 1 1.49161
IHH indian hedgehog 1.4575
SOX6 SRY (sex determining region Y)-box 6 1.4057
FGFR3 fibroblast growth factor receptor 3 1.28547
BMP2 bone morphogenetic protein 2 1.23049
SOX5 SRY (sex determining region Y)-box 5 1.18334
ZNF219 zinc finger protein 219 1.03127
PTHLH parathyroid hormone-like hormone 0.988466
DTX3 deltex 3, E3 ubiquitin ligase 0.980651
TGFB3 transforming growth factor, beta 3 0.95384
RUNX2 runt-related transcription factor 2 0.931908
TGFB1 transforming growth factor, beta 1 0.9118
ITGA10 integrin, alpha 10 0.907535
COL11A2 collagen, type XI, alpha 2 0.870639
ALPL alkaline phosphatase, liver/bone/kidney 0.836575
ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 0.830291
EXTL2 exostosin-like glycosyltransferase 2 0.826523
COL11A2P1 collagen, type XI, alpha 2 pseudogene 1 0.826104
ALPPL2 alkaline phosphatase, placental-like 2 0.780648
ALPP alkaline phosphatase, placental 0.779401
IGF1 insulin-like growth factor 1 (somatomedin C) 0.768197
PAX1 paired box 1 0.767368
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 0.765296
HOXA2 homeobox A2 0.728975
BMP7 bone morphogenetic protein 7 0.726918
GDF5 growth differentiation factor 5 0.724041
KLF4 Kruppel-like factor 4 (gut) 0.717061
SRY sex determining region Y 0.682695
VCAN versican 0.6461
TENM4 teneurin transmembrane protein 4 0.64529
EWSR1 EWS RNA-binding protein 1 0.644074
BGLAP bone gamma-carboxyglutamate (gla) protein 0.643263
LOXL4 lysyl oxidase-like 4 0.627889
MIRLET7E microRNA let-7e 0.606916
IGFBP3 insulin-like growth factor binding protein 3 0.595656
BMP4 bone morphogenetic protein 4 0.595656
TENM1 teneurin transmembrane protein 1 0.585625
XYLT2 xylosyltransferase II 0.585224
THY1 Thy-1 cell surface antigen 0.584823
RGS10 regulator of G-protein signaling 10 0.584022
CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 0.576415
WRAP73 WD repeat containing, antisense to TP73 0.559652
PTH parathyroid hormone 0.555671
FRK fyn-related Src family tyrosine kinase 0.553286
NPR2 natriuretic peptide receptor 2 0.552888
SRSF5 serine/arginine-rich splicing factor 5 0.548914
RGS2 regulator of G-protein signaling 2 0.541377
FRZB frizzled-related protein 0.527928
PDGFB platelet-derived growth factor beta polypeptide 0.517678
DEFB104B defensin, beta 104B 0.506672
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.499223
RTKN rhotekin 0.498832
COMP cartilage oligomeric matrix protein 0.493745
KCNB2 potassium channel, voltage gated Shab related subfamily B, member 2 0.487886
NELL1 NEL-like 1 (chicken) 0.482817
PTH1R parathyroid hormone 1 receptor 0.482038
STAT1 signal transducer and activator of transcription 1, 91kDa 0.481259
STIM2 stromal interaction molecule 2 0.475812
RGS7 regulator of G-protein signaling 7 0.473869
DLX4 distal-less homeobox 4 0.469211
MMP13 matrix metallopeptidase 13 0.465723
PLAGL1 pleiomorphic adenoma gene-like 1 0.464561
XYLT1 xylosyltransferase I 0.463787
CD34 CD34 molecule 0.460692
TRPS1 trichorhinophalangeal syndrome I 0.454898
FN1 fibronectin 1 0.45374
SFRP1 secreted frizzled-related protein 1 0.435289
NMBR neuromedin B receptor 0.429165
MIA melanoma inhibitory activity 0.428018
GDF11 growth differentiation factor 11 0.426872
MGP matrix Gla protein 0.42649
HOXD11 homeobox D11 0.415814
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4 0.407453
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 0.405935
NOG noggin 0.40366
FGF1 fibroblast growth factor 1 (acidic) 0.395709
HOXA4 homeobox A4 0.391176
HAPLN1 hyaluronan and proteoglycan link protein 1 0.388912
RGS5 regulator of G-protein signaling 5 0.382884
BMP6 bone morphogenetic protein 6 0.381003
FOSL1 FOS-like antigen 1 0.381003
HHEX hematopoietically expressed homeobox 0.379499
MSX2 msh homeobox 2 0.367876
IVD isovaleryl-CoA dehydrogenase 0.365633
FFAR4 free fatty acid receptor 4 0.364886
LOXL2 lysyl oxidase-like 2 0.358919
JUN jun proto-oncogene 0.358919
SP7 Sp7 transcription factor 0.356686
HOXA13 homeobox A13 0.350001
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.345928
S100A1 S100 calcium binding protein A1 0.345558
CACNA1H calcium channel, voltage-dependent, T type, alpha 1H subunit 0.344079
MATN1 matrilin 1, cartilage matrix protein 0.342971
FGFR1 fibroblast growth factor receptor 1 0.337072
SLC26A2 solute carrier family 26 (anion exchanger), member 2 0.331927
CRABP1 cellular retinoic acid binding protein 1 0.327896
RARS arginyl-tRNA synthetase 0.324239
IGFBP5 insulin-like growth factor binding protein 5 0.323874
INS insulin 0.323874
CDC6 cell division cycle 6 0.320956
TGFB2 transforming growth factor, beta 2 0.320591
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.31877
SDHAF2 succinate dehydrogenase complex assembly factor 2 0.314772
HOXA5 homeobox A5 0.313683
IGBP1 immunoglobulin (CD79A) binding protein 1 0.308251
SPP1 secreted phosphoprotein 1 0.301398
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.298524
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1 0.297447
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.297089
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3 0.291365
LOXL1 lysyl oxidase-like 1 0.289226
CTGF connective tissue growth factor 0.285671
CD44 CD44 molecule (Indian blood group) 0.281423
MAPK14 mitogen-activated protein kinase 14 0.279307
FOXC2 forkhead box C2 0.278603
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.2779
MCM8 minichromosome maintenance complex component 8 0.274045
NPPC natriuretic peptide C 0.273696
WIF1 WNT inhibitory factor 1 0.272997
ERG v-ets avian erythroblastosis virus E26 oncogene homolog 0.269867
HOXD13 homeobox D13 0.268137
RECK reversion-inducing-cysteine-rich protein with kazal motifs 0.267102
CNN1 calponin 1, basic, smooth muscle 0.258243
SHH sonic hedgehog 0.257907
MCAM melanoma cell adhesion molecule 0.257572
WNT7A wingless-type MMTV integration site family, member 7A 0.255234
CRLF1 cytokine receptor-like factor 1 0.253908
MAPK11 mitogen-activated protein kinase 11 0.25259
NDN necdin, melanoma antigen (MAGE) family member 0.249329
FOXO1 forkhead box O1 0.243918
FAT1 FAT atypical cadherin 1 0.23961
KLF5 Kruppel-like factor 5 (intestinal) 0.235748
C11ORF95 chromosome 11 open reading frame 95 0.235651
TSHR thyroid stimulating hormone receptor 0.231482
ESRRA estrogen-related receptor alpha 0.229568
TERF1 telomeric repeat binding factor (NIMA-interacting) 1 0.225395
NMB neuromedin B 0.223419
SFRP2 secreted frizzled-related protein 2 0.221989
ATF2 activating transcription factor 2 0.220604
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.217974
SMAD5 SMAD family member 5 0.217762
CHPF chondroitin polymerizing factor 0.217346
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 0.21673
RGS4 regulator of G-protein signaling 4 0.215341
SEC24C SEC24 family member C 0.208625
DLX5 distal-less homeobox 5 0.205636
PRTG protogenin 0.200634
SEC24D SEC24 family member D 0.198805
MYOD1 myogenic differentiation 1 0.198103
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.197595
PCNA proliferating cell nuclear antigen 0.197581
ITGA11 integrin, alpha 11 0.197336
OSTF1 osteoclast stimulating factor 1 0.197276
ELN elastin 0.197203
UGDH UDP-glucose 6-dehydrogenase 0.195942
ADIG adipogenin 0.195921
FOXF2 forkhead box F2 0.195047
TNC tenascin C 0.195032
MKL2 MKL/myocardin-like 2 0.195032
BMP3 bone morphogenetic protein 3 0.195016
ANKH ANKH inorganic pyrophosphate transport regulator 0.194546
FGF18 fibroblast growth factor 18 0.194529
ADAM12 ADAM metallopeptidase domain 12 0.194496
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.194335
IGF1R insulin-like growth factor 1 receptor 0.193903
RB1CC1 RB1-inducible coiled-coil 1 0.193665
SLC2A6 solute carrier family 2 (facilitated glucose transporter), member 6 0.193392
GDF10 growth differentiation factor 10 0.193353
TP53 tumor protein p53 0.193315
S100G S100 calcium binding protein G 0.192549
FOSL2 FOS-like antigen 2 0.192261
ADAM23 ADAM metallopeptidase domain 23 0.191762
TGFBI transforming growth factor, beta-induced, 68kDa 0.191671
FOXD2 forkhead box D2 0.191613
BGN biglycan 0.191602
LTF lactotransferrin 0.191237
ENO2 enolase 2 (gamma, neuronal) 0.191055
IBSP integrin-binding sialoprotein 0.191007
MKI67 marker of proliferation Ki-67 0.190734
DLX6 distal-less homeobox 6 0.190594
RB1 retinoblastoma 1 0.190363
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9 0.190284
PLVAP plasmalemma vesicle associated protein 0.190258
AACS acetoacetyl-CoA synthetase 0.190152
FANCB Fanconi anemia, complementation group B 0.18958
EZR ezrin 0.18941
COL11A1 collagen, type XI, alpha 1 0.18941
HOXB2 homeobox B2 0.189238
ECM1 extracellular matrix protein 1 0.188691
ADAM22 ADAM metallopeptidase domain 22 0.18843
LGALS1 lectin, galactoside-binding, soluble, 1 0.188257
MSX1 msh homeobox 1 0.188066
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.187791
DCN decorin 0.187658
EPHA5 EPH receptor A5 0.187641
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) 0.187524
CYGB cytoglobin 0.187474
MYOM2 myomesin 2 0.187389
ADAM28 ADAM metallopeptidase domain 28 0.187372
HDLBP high density lipoprotein binding protein 0.187182
KLRC3 killer cell lectin-like receptor subfamily C, member 3 0.187182
TWIST2 twist family bHLH transcription factor 2 0.187095
DSPP dentin sialophosphoprotein 0.187043
WNT1 wingless-type MMTV integration site family, member 1 0.186972
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble 0.186318
SDC3 syndecan 3 0.186072
LRP5 low density lipoprotein receptor-related protein 5 0.18586
AIRE autoimmune regulator 0.185841
MAPK9 mitogen-activated protein kinase 9 0.185605
FGFR2 fibroblast growth factor receptor 2 0.185585
LOX lysyl oxidase 0.185303
DPP7 dipeptidyl-peptidase 7 0.185097
MATN3 matrilin 3 0.184824
DLX1 distal-less homeobox 1 0.184653
NANOG Nanog homeobox 0.184501
HBA1 hemoglobin, alpha 1 0.184391
ACVR1 activin A receptor, type I 0.184369
HBA2 hemoglobin, alpha 2 0.183642
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.183286
LGALS3 lectin, galactoside-binding, soluble, 3 0.182994
ACPP acid phosphatase, prostate 0.182414
ADAM9 ADAM metallopeptidase domain 9 0.182362
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 0.182336
BCHE butyrylcholinesterase 0.180735
RRAS related RAS viral (r-ras) oncogene homolog 0.180646