increased red cell sickling tendency Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0008346
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Genes

47 genes associated with the increased red cell sickling tendency phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) 2.23385
UGT1A10 UDP glucuronosyltransferase 1 family, polypeptide A10 2.10189
OR51B5 olfactory receptor, family 51, subfamily B, member 5 1.40061
NPRL3 nitrogen permease regulator-like 3 (S. cerevisiae) 1.32793
OTUD3 OTU deubiquitinase 3 1.20717
OR51B6 olfactory receptor, family 51, subfamily B, member 6 1.20411
RFX3 regulatory factor X, 3 (influences HLA class II expression) 1.10834
MCC mutated in colorectal cancers 1.04365
CDH9 cadherin 9, type 2 (T1-cadherin) 1.03761
ZBED9 zinc finger, BED-type containing 9 0.994551
PHEX phosphate regulating endopeptidase homolog, X-linked 0.969142
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 0.96245
PHACTR1 phosphatase and actin regulator 1 0.952379
HYKK hydroxylysine kinase 0.950563
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) 0.945838
CDH26 cadherin 26 0.928309
CACNA2D2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 0.915923
HK2 hexokinase 2 0.901369
ATP6V0A4 ATPase, H+ transporting, lysosomal V0 subunit a4 0.899912
NLGN4X neuroligin 4, X-linked 0.871278
BMPR1A bone morphogenetic protein receptor, type IA 0.846692
MAP2K5 mitogen-activated protein kinase kinase 5 0.845405
IL17RD interleukin 17 receptor D 0.844241
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.844241
SYCE3 synaptonemal complex central element protein 3 0.817516
PRMT8 protein arginine methyltransferase 8 0.816759
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 0.806402
SPRED3 sprouty-related, EVH1 domain containing 3 0.7965
NRP1 neuropilin 1 0.794657
PPAP2B phosphatidic acid phosphatase type 2B 0.771787
MED27 mediator complex subunit 27 0.762996
PAX8 paired box 8 0.756252
ASUN asunder spermatogenesis regulator 0.752816
USP43 ubiquitin specific peptidase 43 0.751382
WWOX WW domain containing oxidoreductase 0.745419
RAD51B RAD51 paralog B 0.733218
SVIL supervillin 0.731918
CSMD1 CUB and Sushi multiple domains 1 0.713947
SLC24A2 solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 0.706786
RNF220 ring finger protein 220 0.705692
JAKMIP1 janus kinase and microtubule interacting protein 1 0.703894
KLHL33 kelch-like family member 33 0.699708
UROC1 urocanate hydratase 1 0.676017
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.668525
C14ORF132 chromosome 14 open reading frame 132 0.66391
LOC643542 uncharacterized LOC643542 0.653823
ACAN aggrecan 0.622665