hypointensity of cerebral white matter on mri Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description A darker than expected signal on magnetic resonance imaging emanating from the cerebral white matter. (Human Phenotype Ontology, HP_0007103)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0007103
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Genes

57 genes associated with the hypointensity of cerebral white matter on mri phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
TRIM65 tripartite motif containing 65 1.72215
TRIM47 tripartite motif containing 47 1.47083
WBP2 WW domain binding protein 2 1.26698
PDCD11 programmed cell death 11 1.07635
FBF1 Fas (TNFRSF6) binding factor 1 0.974864
MRPL38 mitochondrial ribosomal protein L38 0.93785
NT5C2 5'-nucleotidase, cytosolic II 0.923916
PMF1 polyamine-modulated factor 1 0.919744
UNC13D unc-13 homolog D (C. elegans) 0.915706
COL25A1 collagen, type XXV, alpha 1 0.899912
MTHFD1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 0.860376
PTGDR prostaglandin D2 receptor (DP) 0.844241
ACOX1 acyl-CoA oxidase 1, palmitoyl 0.834343
CALHM1 calcium homeostasis modulator 1 0.809986
AMZ2P1 archaelysin family metallopeptidase 2 pseudogene 1 0.809986
PRDM16 PR domain containing 16 0.790435
TRPM1 transient receptor potential cation channel, subfamily M, member 1 0.790435
PPP1R36 protein phosphatase 1, regulatory subunit 36 0.752335
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 0.747666
CHL1 cell adhesion molecule L1-like 0.743226
SETBP1 SET binding protein 1 0.734535
LEPROTL1 leptin receptor overlapping transcript-like 1 0.734535
FOXP2 forkhead box P2 0.730213
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble 0.722116
CNTNAP2 contactin associated protein-like 2 0.707523
PITRM1 pitrilysin metallopeptidase 1 0.707523
IGSF21 immunoglobin superfamily, member 21 0.687523
KIRREL3 kin of IRRE like 3 (Drosophila) 0.681679
LOC285692 uncharacterized LOC285692 0.681679
DHX57 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 0.675718
GEMIN6 gem (nuclear organelle) associated protein 6 0.669923
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.669923
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.664442
GNG12 guanine nucleotide binding protein (G protein), gamma 12 0.656743
SLC25A44 solute carrier family 25, member 44 0.656743
ICA1L islet cell autoantigen 1,69kDa-like 0.644641
GNA13 guanine nucleotide binding protein (G protein), alpha 13 0.642222
KCNK2 potassium channel, two pore domain subfamily K, member 2 0.635284
NCOA2 nuclear receptor coactivator 2 0.633071
GMDS GDP-mannose 4,6-dehydratase 0.628781
PPM1H protein phosphatase, Mg2+/Mn2+ dependent, 1H 0.622665
CALCRL calcitonin receptor-like 0.622665
FHOD3 formin homology 2 domain containing 3 0.614969
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 0.611229
PCGF6 polycomb group ring finger 6 0.604135
MYO6 myosin VI 0.599122
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit 0.597506
COLGALT2 collagen beta(1-O)galactosyltransferase 2 0.589794
SH3PXD2A SH3 and PX domains 2A 0.588321
CARF calcium responsive transcription factor 0.58687
SRSF7 serine/arginine-rich splicing factor 7 0.58687
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.58687
AK9 adenylate kinase 9 0.580678
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1 0.57836
GALM galactose mutarotase (aldose 1-epimerase) 0.577224
WASF3 WAS protein family, member 3 0.576102
RHBDD1 rhomboid domain containing 1 0.573902