histone locus body Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A nuclear body associated with the histone gene locus that is thought to contain all of the factors necessary for histone mRNA transcription and pre-mRNA processing. In Drosophila, U7 snRNP is located in the histone locus body rather than the distinct Cajal body. (Gene Ontology, GO_0035363)
Similar Terms
Downloads & Tools

Genes

97 proteins co-occuring with the histone locus body cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TARBP2 TAR (HIV-1) RNA binding protein 2 2.75692
SCX scleraxis basic helix-loop-helix transcription factor 1.56959
LSM11 LSM11, U7 small nuclear RNA associated 1.53049
LSM10 LSM10, U7 small nuclear RNA associated 1.36417
ERBB2 erb-b2 receptor tyrosine kinase 2 1.3412
LCN2 lipocalin 2 1.04281
NPAT nuclear protein, ataxia-telangiectasia locus 0.981473
HINFP histone H4 transcription factor 0.884705
FUT2 fucosyltransferase 2 (secretor status included) 0.881477
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa 0.875488
ERVW-1 endogenous retrovirus group W, member 1 0.864907
SCIN scinderin 0.843778
CKAP2 cytoskeleton associated protein 2 0.843318
STX8 syntaxin 8 0.805689
SUMF2 sulfatase modifying factor 2 0.716791
ARSH arylsulfatase family, member H 0.688576
POLN polymerase (DNA directed) nu 0.638005
COIL coilin 0.621379
LRRC4C leucine rich repeat containing 4C 0.619255
PGS1 phosphatidylglycerophosphate synthase 1 0.616709
CASP8AP2 caspase 8 associated protein 2 0.604862
DTX1 deltex 1, E3 ubiquitin ligase 0.578416
SPATA5 spermatogenesis associated 5 0.57008
SLBP stem-loop binding protein 0.511233
PSD pleckstrin and Sec7 domain containing 0.492561
ZAN zonadhesin (gene/pseudogene) 0.491348
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9 0.478843
APEH acylaminoacyl-peptide hydrolase 0.447259
MEGF6 multiple EGF-like-domains 6 0.44052
EPHA4 EPH receptor A4 0.43617
NBPF8 neuroblastoma breakpoint family, member 8 0.430647
POLI polymerase (DNA directed) iota 0.425138
HYLS1 hydrolethalus syndrome 1 0.420036
TSKU tsukushi, small leucine rich proteoglycan 0.415337
GPR148 G protein-coupled receptor 148 0.413773
TECR trans-2,3-enoyl-CoA reductase 0.412992
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 0.409869
HOXA1 homeobox A1 0.381199
SYMPK symplekin 0.380429
LST1 leukocyte specific transcript 1 0.373899
POU2F1 POU class 2 homeobox 1 0.368536
SELENBP1 selenium binding protein 1 0.364331
FANCB Fanconi anemia, complementation group B 0.356324
CBS cystathionine-beta-synthase 0.353282
LGALS4 lectin, galactoside-binding, soluble, 4 0.349484
RSPO1 R-spondin 1 0.34645
DDX20 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 0.340395
KNTC1 kinetochore associated 1 0.337751
DCPS decapping enzyme, scavenger 0.328708
BAK1 BCL2-antagonist/killer 1 0.324951
POU2F3 POU class 2 homeobox 3 0.314091
CAND2 cullin-associated and neddylation-dissociated 2 (putative) 0.312224
SCN2A sodium channel, voltage gated, type II alpha subunit 0.309613
FANCL Fanconi anemia, complementation group L 0.307377
FBLL1 fibrillarin-like 1 0.295489
SH2D1A SH2 domain containing 1A 0.289569
LSM1 LSM1, U6 small nuclear RNA associated 0.286983
CDR1 cerebellar degeneration-related protein 1, 34kDa 0.285138
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa 0.285138
TBP TATA box binding protein 0.284769
TOX thymocyte selection-associated high mobility group box 0.284769
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4 0.281453
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19 0.273
HIST1H1B histone cluster 1, H1b 0.260566
PHGDH phosphoglycerate dehydrogenase 0.259473
WDHD1 WD repeat and HMG-box DNA binding protein 1 0.259109
DAND5 DAN domain family member 5, BMP antagonist 0.255107
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.254017
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 0.252927
SRSF2 serine/arginine-rich splicing factor 2 0.251839
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.248578
THOP1 thimet oligopeptidase 1 0.243519
CDK2 cyclin-dependent kinase 2 0.242797
MLC1 megalencephalic leukoencephalopathy with subcortical cysts 1 0.240636
GUSB glucuronidase, beta 0.240636
CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 0.235249
CRX cone-rod homeobox 0.232029
SYCN syncollin 0.229888
NBPF10 neuroblastoma breakpoint family, member 10 0.227752
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.225267
ILF3 interleukin enhancer binding factor 3, 90kDa 0.203022
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.203022
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.201335
MOGS mannosyl-oligosaccharide glucosidase 0.194045
HLA-A major histocompatibility complex, class I, A 0.185469
CSN1S1 casein alpha s1 0.18516
CD2 CD2 molecule 0.179459
FRY furry homolog (Drosophila) 0.177724
CYP2D7 cytochrome P450, family 2, subfamily D, polypeptide 7 (gene/pseudogene) 0.168101
PRRC2A proline-rich coiled-coil 2A 0.166167
HSD11B1 hydroxysteroid (11-beta) dehydrogenase 1 0.162546
GNAS GNAS complex locus 0.16233
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6 0.161693
TCHH trichohyalin 0.160658
HEXB hexosaminidase B (beta polypeptide) 0.15776
PNLIP pancreatic lipase 0.157578
FGD1 FYVE, RhoGEF and PH domain containing 1 0.156863