hippocampus Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description A curved elongated ridge that extends over the floor of the descending horn of each lateral ventricle of the brain and consists of gray matter covered on the ventricular surface with white matter;nThe hippocampus is a part of the temporal lobe, which has a well established role in learning, memory and emotion.|A part of the brain consisting of a three layered cortex located in the forebrain bordering the medial surface of the lateral ventricle. The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum. (Experimental Factor Ontology, EFO_0000530)
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Genes

208 genes co-occuring with the biological term hippocampus in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ACOT7 acyl-CoA thioesterase 7
ADAM10 ADAM metallopeptidase domain 10
ADNP activity-dependent neuroprotector homeobox
ADNP2 ADNP homeobox 2
AGER advanced glycosylation end product-specific receptor
AHSG alpha-2-HS-glycoprotein
ALDH1A2 aldehyde dehydrogenase 1 family, member A2
ALDOC aldolase C, fructose-bisphosphate
ALOX5 arachidonate 5-lipoxygenase
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
AOC3 amine oxidase, copper containing 3
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
B2M beta-2-microglobulin
BACE1 beta-site APP-cleaving enzyme 1
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein)
BCL2 B-cell CLL/lymphoma 2
BDNF brain-derived neurotrophic factor
BECN1 beclin 1, autophagy related
BLVRA biliverdin reductase A
BMP4 bone morphogenetic protein 4
BMP6 bone morphogenetic protein 6
BRAF B-Raf proto-oncogene, serine/threonine kinase
C9ORF72 chromosome 9 open reading frame 72
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit
CACNG2 calcium channel, voltage-dependent, gamma subunit 2
CACNG3 calcium channel, voltage-dependent, gamma subunit 3
CACNG4 calcium channel, voltage-dependent, gamma subunit 4
CALB2 calbindin 2
CASP1 caspase 1, apoptosis-related cysteine peptidase
CASP3 caspase 3, apoptosis-related cysteine peptidase
CHAT choline O-acetyltransferase
CHMP2B charged multivesicular body protein 2B
CHRM1 cholinergic receptor, muscarinic 1
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CHRNB4 cholinergic receptor, nicotinic, beta 4 (neuronal)
CLU clusterin
CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family)
CNR1 cannabinoid receptor 1 (brain)
CNR2 cannabinoid receptor 2 (macrophage)
CNTF ciliary neurotrophic factor
CNTNAP2 contactin associated protein-like 2
COMT catechol-O-methyltransferase
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor
CREB1 cAMP responsive element binding protein 1
CRP C-reactive protein, pentraxin-related
CSK c-src tyrosine kinase
CTGF connective tissue growth factor
CTNNBIP1 catenin, beta interacting protein 1
CXCL8 chemokine (C-X-C motif) ligand 8
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
DAPK1 death-associated protein kinase 1
DISC1 disrupted in schizophrenia 1
DLG4 discs, large homolog 4 (Drosophila)
DPYSL3 dihydropyrimidinase-like 3
DRD1 dopamine receptor D1
DRD2 dopamine receptor D2
DRD3 dopamine receptor D3
DRD4 dopamine receptor D4
DRD5 dopamine receptor D5
DTNBP1 dystrobrevin binding protein 1
EFNB3 ephrin-B3
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
ELAVL4 ELAV like neuron-specific RNA binding protein 4
ENO2 enolase 2 (gamma, neuronal)
EPHB1 EPH receptor B1
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
EPO erythropoietin
ERBB4 erb-b2 receptor tyrosine kinase 4
ESR1 estrogen receptor 1
FAAH fatty acid amide hydrolase
FGF2 fibroblast growth factor 2 (basic)
FLNA filamin A, alpha
FOS FBJ murine osteosarcoma viral oncogene homolog
FUS FUS RNA binding protein
GABRG1 gamma-aminobutyric acid (GABA) A receptor, gamma 1
GABRG2 gamma-aminobutyric acid (GABA) A receptor, gamma 2
GABRG3 gamma-aminobutyric acid (GABA) A receptor, gamma 3
GAD1 glutamate decarboxylase 1 (brain, 67kDa)
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
GDF3 growth differentiation factor 3
GDNF glial cell derived neurotrophic factor
GJA1 gap junction protein, alpha 1, 43kDa
GJB1 gap junction protein, beta 1, 32kDa
GRIA1 glutamate receptor, ionotropic, AMPA 1
GRIA2 glutamate receptor, ionotropic, AMPA 2
GRIA3 glutamate receptor, ionotropic, AMPA 3
GRIK1 glutamate receptor, ionotropic, kainate 1
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B
GRM2 glutamate receptor, metabotropic 2
GRM3 glutamate receptor, metabotropic 3
GRN granulin
GSK3A glycogen synthase kinase 3 alpha
GSK3B glycogen synthase kinase 3 beta
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HLA-C major histocompatibility complex, class I, C
HMBOX1 homeobox containing 1
HMOX1 heme oxygenase 1
HRH4 histamine receptor H4
HSPB1 heat shock 27kDa protein 1
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
HTR6 5-hydroxytryptamine (serotonin) receptor 6, G protein-coupled
HTRA2 HtrA serine peptidase 2
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF1R insulin-like growth factor 1 receptor
IL18 interleukin 18
IL1B interleukin 1, beta
IL6 interleukin 6
KALRN kalirin, RhoGEF kinase
KCNIP3 Kv channel interacting protein 3, calsenilin
KCNJ10 potassium channel, inwardly rectifying subfamily J, member 10
KCNQ2 potassium channel, voltage gated KQT-like subfamily Q, member 2
KLK1 kallikrein 1
L1CAM L1 cell adhesion molecule
LAMB1 laminin, beta 1
LIF leukemia inhibitory factor
LOC643387 TAR DNA binding protein pseudogene
LRRK1 leucine-rich repeat kinase 1
LRRK2 leucine-rich repeat kinase 2
MAPK14 mitogen-activated protein kinase 14
MAPK7 mitogen-activated protein kinase 7
MAPT microtubule-associated protein tau
MIR126 microRNA 126
MIR137 microRNA 137
MIR204 microRNA 204
MIR218-1 microRNA 218-1
MME membrane metallo-endopeptidase
MTNR1A melatonin receptor 1A
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYC v-myc avian myelocytomatosis viral oncogene homolog
NES nestin
NEUROD2 neuronal differentiation 2
NGF nerve growth factor (beta polypeptide)
NGFR nerve growth factor receptor
NLGN1 neuroligin 1
NPC1 Niemann-Pick disease, type C1
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NR3C2 nuclear receptor subfamily 3, group C, member 2
NRG1 neuregulin 1
NTF3 neurotrophin 3
NTRK2 neurotrophic tyrosine kinase, receptor, type 2
OPRM1 opioid receptor, mu 1
PAK3 p21 protein (Cdc42/Rac)-activated kinase 3
PANX1 pannexin 1
PDYN prodynorphin
PEBP1 phosphatidylethanolamine binding protein 1
PHACTR3 phosphatase and actin regulator 3
PLA2G1B phospholipase A2, group IB (pancreas)
PLGRKT plasminogen receptor, C-terminal lysine transmembrane protein
PLP2 proteolipid protein 2 (colonic epithelium-enriched)
PLSCR1 phospholipid scramblase 1
PSEN1 presenilin 1
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
QKI QKI, KH domain containing, RNA binding
RAB5A RAB5A, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RBM4 RNA binding motif protein 4
RPS6 ribosomal protein S6
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3
RTN4R reticulon 4 receptor
S100A13 S100 calcium binding protein A13
S100A4 S100 calcium binding protein A4
S100A5 S100 calcium binding protein A5
SCN1A sodium channel, voltage gated, type I alpha subunit
SCN2A sodium channel, voltage gated, type II alpha subunit
SCN3B sodium channel, voltage gated, type III beta subunit
SEZ6L2 seizure related 6 homolog (mouse)-like 2
SIRT1 sirtuin 1
SIRT3 sirtuin 3
SIRT5 sirtuin 5
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13
SLC4A10 solute carrier family 4, sodium bicarbonate transporter, member 10
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SNAP25 synaptosomal-associated protein, 25kDa
SNAP91 synaptosomal-associated protein, 91kDa
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SOCS1 suppressor of cytokine signaling 1
SORL1 sortilin-related receptor, L(DLR class) A repeats containing
SQSTM1 sequestosome 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SRR serine racemase
TARDBP TAR DNA binding protein
TBP TATA box binding protein
TGFB1I1 transforming growth factor beta 1 induced transcript 1
TMED10 transmembrane emp24-like trafficking protein 10 (yeast)
TNR tenascin R
TP53 tumor protein p53
TP63 tumor protein p63
TP73 tumor protein p73
TPH2 tryptophan hydroxylase 2
TRPV1 transient receptor potential cation channel, subfamily V, member 1
TUBB4B tubulin, beta 4B class IVb
UBQLN1 ubiquilin 1
UTP11L UTP11-like, U3 small nucleolar ribonucleoprotein (yeast)
VDAC1 voltage-dependent anion channel 1
VEGFA vascular endothelial growth factor A
VGF VGF nerve growth factor inducible
WWC1 WW and C2 domain containing 1
ZNF804A zinc finger protein 804A