hippocampal Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

218 genes co-occuring with the biological term hippocampal in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ACHE acetylcholinesterase (Yt blood group)
ACSL4 acyl-CoA synthetase long-chain family member 4
ADAM22 ADAM metallopeptidase domain 22
ADCY1 adenylate cyclase 1 (brain)
ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary)
ADIPOQ adiponectin, C1Q and collagen domain containing
ADNP activity-dependent neuroprotector homeobox
ADNP2 ADNP homeobox 2
ADORA2A adenosine A2a receptor
AGMAT agmatine ureohydrolase (agmatinase)
AKT1 v-akt murine thymoma viral oncogene homolog 1
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
APOC1 apolipoprotein C-I
APOD apolipoprotein D
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
AQP4 aquaporin 4
ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9
ARTN artemin
ATF3 activating transcription factor 3
BDNF brain-derived neurotrophic factor
C11ORF31 chromosome 11 open reading frame 31
C5AR1 complement component 5a receptor 1
C9ORF72 chromosome 9 open reading frame 72
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit
CALB1 calbindin 1, 28kDa
CAMK2A calcium/calmodulin-dependent protein kinase II alpha
CARD10 caspase recruitment domain family, member 10
CASP3 caspase 3, apoptosis-related cysteine peptidase
CBS cystathionine-beta-synthase
CCK cholecystokinin
CDC42 cell division cycle 42
CDK5 cyclin-dependent kinase 5
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35)
CHRM1 cholinergic receptor, muscarinic 1
CHRM3 cholinergic receptor, muscarinic 3
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal)
CNR1 cannabinoid receptor 1 (brain)
CNTF ciliary neurotrophic factor
CNTNAP2 contactin associated protein-like 2
COMT catechol-O-methyltransferase
CREB1 cAMP responsive element binding protein 1
CRH corticotropin releasing hormone
CRHBP corticotropin releasing hormone binding protein
CRHR1 corticotropin releasing hormone receptor 1
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR4 chemokine (C-X-C motif) receptor 4
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYP46A1 cytochrome P450, family 46, subfamily A, polypeptide 1
DAO D-amino-acid oxidase
DAOA D-amino acid oxidase activator
DBN1 drebrin 1
DCX doublecortin
DISC1 disrupted in schizophrenia 1
DLG4 discs, large homolog 4 (Drosophila)
DRD1 dopamine receptor D1
DRD2 dopamine receptor D2
DRD5 dopamine receptor D5
DTNBP1 dystrobrevin binding protein 1
EGFR epidermal growth factor receptor
EID1 EP300 interacting inhibitor of differentiation 1
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
EPO erythropoietin
EPOR erythropoietin receptor
FGF14 fibroblast growth factor 14
FKBP5 FK506 binding protein 5
FMR1 fragile X mental retardation 1
FOXO3 forkhead box O3
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1
GABRG1 gamma-aminobutyric acid (GABA) A receptor, gamma 1
GABRG2 gamma-aminobutyric acid (GABA) A receptor, gamma 2
GABRG3 gamma-aminobutyric acid (GABA) A receptor, gamma 3
GAD1 glutamate decarboxylase 1 (brain, 67kDa)
GFAP glial fibrillary acidic protein
GLUD1 glutamate dehydrogenase 1
GPHN gephyrin
GPM6A glycoprotein M6A
GPR85 G protein-coupled receptor 85
GRIA1 glutamate receptor, ionotropic, AMPA 1
GRIA2 glutamate receptor, ionotropic, AMPA 2
GRIK4 glutamate receptor, ionotropic, kainate 4
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B
GRIN3B glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
GRIP1 glutamate receptor interacting protein 1
GRM1 glutamate receptor, metabotropic 1
GRM2 glutamate receptor, metabotropic 2
GRM3 glutamate receptor, metabotropic 3
GRM5 glutamate receptor, metabotropic 5
GRN granulin
GSK3B glycogen synthase kinase 3 beta
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2
HDAC2 histone deacetylase 2
HLA-C major histocompatibility complex, class I, C
HSD11B1L hydroxysteroid (11-beta) dehydrogenase 1-like
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
HTT huntingtin
IGF2 insulin-like growth factor 2
IL1B interleukin 1, beta
IL1RAPL1 interleukin 1 receptor accessory protein-like 1
IL1RN interleukin 1 receptor antagonist
IL6 interleukin 6
INSR insulin receptor
KALRN kalirin, RhoGEF kinase
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2
KCNJ2 potassium channel, inwardly rectifying subfamily J, member 2
KCNK1 potassium channel, two pore domain subfamily K, member 1
KMT2B lysine (K)-specific methyltransferase 2B
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
LEP leptin
LHX5 LIM homeobox 5
LIMK1 LIM domain kinase 1
LRRK2 leucine-rich repeat kinase 2
MAP2 microtubule-associated protein 2
MAPK1 mitogen-activated protein kinase 1
MAPT microtubule-associated protein tau
MARCKS myristoylated alanine-rich protein kinase C substrate
MECP2 methyl CpG binding protein 2
MET MET proto-oncogene, receptor tyrosine kinase
MIR134 microRNA 134
MIR204 microRNA 204
MIR218-1 microRNA 218-1
MMP9 matrix metallopeptidase 9
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1)
NFE2L2 nuclear factor, erythroid 2-like 2
NGF nerve growth factor (beta polypeptide)
NOS1 nitric oxide synthase 1 (neuronal)
NOS3 nitric oxide synthase 3 (endothelial cell)
NOTCH1 notch 1
NQO2 NAD(P)H dehydrogenase, quinone 2
NR2E1 nuclear receptor subfamily 2, group E, member 1
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NRG1 neuregulin 1
NRGN neurogranin (protein kinase C substrate, RC3)
NRTN neurturin
NTRK3 neurotrophic tyrosine kinase, receptor, type 3
NTSR1 neurotensin receptor 1 (high affinity)
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7
PARP1 poly (ADP-ribose) polymerase 1
PATZ1 POZ (BTB) and AT hook containing zinc finger 1
PCDH11X protocadherin 11 X-linked
PCDH11Y protocadherin 11 Y-linked
PDE8B phosphodiesterase 8B
PEBP1 phosphatidylethanolamine binding protein 1
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
PLAT plasminogen activator, tissue
POU5F1 POU class 5 homeobox 1
PPARG peroxisome proliferator-activated receptor gamma
PPP1R9B protein phosphatase 1, regulatory subunit 9B
PPP3CB protein phosphatase 3, catalytic subunit, beta isozyme
PPP3CC protein phosphatase 3, catalytic subunit, gamma isozyme
PRDX1 peroxiredoxin 1
PRKCA protein kinase C, alpha
PRKD1 protein kinase D1
PRNP prion protein
PSEN1 presenilin 1
PSPN persephin
PTEN phosphatase and tensin homolog
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PVALB parvalbumin
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4
RELN reelin
REM2 RAS (RAD and GEM)-like GTP binding 2
RICTOR RPTOR independent companion of MTOR, complex 2
RIT1 Ras-like without CAAX 1
ROR1 receptor tyrosine kinase-like orphan receptor 1
ROR2 receptor tyrosine kinase-like orphan receptor 2
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
RTN4 reticulon 4
RTN4R reticulon 4 receptor
RYR3 ryanodine receptor 3
S100A4 S100 calcium binding protein A4
SCN1A sodium channel, voltage gated, type I alpha subunit
SCN1B sodium channel, voltage gated, type I beta subunit
SCN2A sodium channel, voltage gated, type II alpha subunit
SCN3B sodium channel, voltage gated, type III beta subunit
SCN8A sodium channel, voltage gated, type VIII alpha subunit
SEMA5B sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
SGK1 serum/glucocorticoid regulated kinase 1
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2
SLC16A7 solute carrier family 16 (monocarboxylate transporter), member 7
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
SLC9A5 solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5
SNAP91 synaptosomal-associated protein, 91kDa
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SOD1 superoxide dismutase 1, soluble
SORL1 sortilin-related receptor, L(DLR class) A repeats containing
ST5 suppression of tumorigenicity 5
STIM1 stromal interaction molecule 1
STIM2 stromal interaction molecule 2
STIP1 stress-induced phosphoprotein 1
STX4 syntaxin 4
STX8 syntaxin 8
SYP synaptophysin
TARDBP TAR DNA binding protein
THBS1 thrombospondin 1
TLR4 toll-like receptor 4
TNF tumor necrosis factor
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast)
TSC22D3 TSC22 domain family, member 3
TUBA1A tubulin, alpha 1a
VCAN versican
VEGFA vascular endothelial growth factor A
VSNL1 visinin-like 1
WWC1 WW and C2 domain containing 1