high vocal center Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description HVC is a nucleus in the brain of the songbirds (order passeriformes) necessary for both the learning and the production of bird song. It is located in the lateral caudal nidopallium and has projections to both the direct and the anterior forebrain pathways. (BRENDA Tissue and Enzyme Source Ontology, BTO_0003390)
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Genes

89 proteins co-occuring with the tissue high vocal center in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
MEA1 male-enhanced antigen 1 1.47101
SCAMP1 secretory carrier membrane protein 1 1.41491
RPL37 ribosomal protein L37 1.37134
FOS FBJ murine osteosarcoma viral oncogene homolog 1.2774
AR androgen receptor 1.27695
RAF1 Raf-1 proto-oncogene, serine/threonine kinase 1.21535
BDNF brain-derived neurotrophic factor 1.15274
DCX doublecortin 1.12615
PVALB parvalbumin 1.08766
MARCKS myristoylated alanine-rich protein kinase C substrate 1.07618
CCNL1 cyclin L1 1.05897
CAPS2 calcyphosine 2 0.931908
SOS1 son of sevenless homolog 1 (Drosophila) 0.90924
SNX2 sorting nexin 2 0.895195
MAP4 microtubule-associated protein 4 0.885862
ZNHIT2 zinc finger, HIT-type containing 2 0.810638
MAP2 microtubule-associated protein 2 0.803961
SYNPR synaptoporin 0.774004
CALB1 calbindin 1, 28kDa 0.769027
ESR1 estrogen receptor 1 0.76364
CDH7 cadherin 7, type 2 0.705993
TXNL4B thioredoxin-like 4B 0.692085
CHN1 chimerin 1 0.677803
CDH19 cadherin 19, type 2 0.670471
CHAT choline O-acetyltransferase 0.661116
IGLV3-10 immunoglobulin lambda variable 3-10 0.657054
MAPT microtubule-associated protein tau 0.641238
CAMK2G calcium/calmodulin-dependent protein kinase II gamma 0.639214
TH tyrosine hydroxylase 0.633144
ACHE acetylcholinesterase (Yt blood group) 0.62385
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.616586
ERAS ES cell expressed Ras 0.609735
GAP43 growth associated protein 43 0.609332
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.595255
HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4 0.590036
EGR1 early growth response 1 0.584022
RAN RAN, member RAS oncogene family 0.582019
DPYSL3 dihydropyrimidinase-like 3 0.578016
NPS neuropeptide S 0.554876
PSENEN presenilin enhancer gamma secretase subunit 0.546929
SLC30A8 solute carrier family 30 (zinc transporter), member 8 0.542963
MPST mercaptopyruvate sulfurtransferase 0.540981
CALB2 calbindin 2 0.527139
ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit 0.518859
SNAP25 synaptosomal-associated protein, 25kDa 0.516497
CAMK2A calcium/calmodulin-dependent protein kinase II alpha 0.506672
SLC25A19 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 0.485545
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.471151
BOC BOC cell adhesion associated, oncogene regulated 0.444884
CDH4 cadherin 4, type 1, R-cadherin (retinal) 0.431843
CTNNBIP1 catenin, beta interacting protein 1 0.429165
EXTL3 exostosin-like glycosyltransferase 3 0.423818
RBFOX3 RNA binding protein, fox-1 homolog (C. elegans) 3 0.42191
EMX1 empty spiracles homeobox 1 0.421529
RELN reelin 0.420004
NCAM1 neural cell adhesion molecule 1 0.417718
GRHL1 grainyhead-like 1 (Drosophila) 0.416957
NUMBL numb homolog (Drosophila)-like 0.395331
TBR1 T-box, brain, 1 0.387027
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1 0.38326
IFNL3 interferon, lambda 3 0.364139
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.359292
SGPL1 sphingosine-1-phosphate lyase 1 0.350001
CLEC3B C-type lectin domain family 3, member B 0.345188
ESR2 estrogen receptor 2 (ER beta) 0.340388
NRGN neurogranin (protein kinase C substrate, RC3) 0.338545
CBS cystathionine-beta-synthase 0.334865
UROD uroporphyrinogen decarboxylase 0.325701
KRAS Kirsten rat sarcoma viral oncogene homolog 0.294223
NRCAM neuronal cell adhesion molecule 0.293151
FLNC filamin C, gamma 0.291722
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 0.290295
SLC16A4 solute carrier family 16, member 4 0.28887
RAB27A RAB27A, member RAS oncogene family 0.288158
GRIK1 glutamate receptor, ionotropic, kainate 1 0.261624
CAMK2B calcium/calmodulin-dependent protein kinase II beta 0.260267
CTH cystathionine gamma-lyase 0.259591
PORCN porcupine homolog (Drosophila) 0.253908
MAP2K1 mitogen-activated protein kinase kinase 1 0.251934
GPR182 G protein-coupled receptor 182 0.249977
VLDLR very low density lipoprotein receptor 0.242672
RASA1 RAS p21 protein activator (GTPase activating protein) 1 0.237216
NEFM neurofilament, medium polypeptide 0.234016
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic) 0.229299
PER3 period circadian clock 3 0.228764
RALA v-ral simian leukemia viral oncogene homolog A (ras related) 0.217974
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.21673
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.21673
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.216126