hairy root culture Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description A relatively new type of plant culture, which consists of highly branched roots of a plant, covered with a mass of tiny root hairs. (BRENDA Tissue and Enzyme Source Ontology, BTO_0003915)
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Genes

56 proteins co-occuring with the tissue hairy root culture in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 2.19664
HPD 4-hydroxyphenylpyruvate dioxygenase 1.3554
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) 1.19089
LUM lumican 1.15495
CLNK cytokine-dependent hematopoietic cell linker 1.15185
ZFYVE1 zinc finger, FYVE domain containing 1 1.05985
HMGA1 high mobility group AT-hook 1 1.04313
PANX3 pannexin 3 1.02995
TECR trans-2,3-enoyl-CoA reductase 0.960744
PANX2 pannexin 2 0.940066
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 0.930621
CASD1 CAS1 domain containing 1 0.89902
SRM spermidine synthase 0.876974
TRAF2 TNF receptor-associated factor 2 0.838672
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 0.818994
GUSB glucuronidase, beta 0.770685
FDPS farnesyl diphosphate synthase 0.747515
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) 0.721166
CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2 0.717061
ODC1 ornithine decarboxylase 1 0.712959
KLF6 Kruppel-like factor 6 0.712139
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.700671
B4GALNT2 beta-1,4-N-acetyl-galactosaminyl transferase 2 0.688
FDFT1 farnesyl-diphosphate farnesyltransferase 1 0.66925
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 0.655024
PANX1 pannexin 1 0.627081
TAT tyrosine aminotransferase 0.585224
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3 0.583621
EN1 engrailed homeobox 1 0.564035
IPP intracisternal A particle-promoted polypeptide 0.561245
KIR2DL1 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1 0.537416
SCN2A sodium channel, voltage gated, type II alpha subunit 0.523194
GLUL glutamate-ammonia ligase 0.512171
PNMA2 paraneoplastic Ma antigen 2 0.472704
HBD hemoglobin, delta 0.468824
PFN1 profilin 1 0.442962
WDHD1 WD repeat and HMG-box DNA binding protein 1 0.408592
GGPS1 geranylgeranyl diphosphate synthase 1 0.370496
HBB hemoglobin, beta 0.355942
UGT1A3 UDP glucuronosyltransferase 1 family, polypeptide A3 0.354084
SLC35A2 solute carrier family 35 (UDP-galactose transporter), member A2 0.347778
CALR calreticulin 0.334498
IFNA2 interferon, alpha 2 0.330827
POR P450 (cytochrome) oxidoreductase 0.33046
UGT1A7 UDP glucuronosyltransferase 1 family, polypeptide A7 0.320227
UGT1A10 UDP glucuronosyltransferase 1 family, polypeptide A10 0.316224
UGT1A8 UDP glucuronosyltransferase 1 family, polypeptide A8 0.315135
UGT1A5 UDP glucuronosyltransferase 1 family, polypeptide A5 0.315135
UGT1A4 UDP glucuronosyltransferase 1 family, polypeptide A4 0.312957
CD9 CD9 molecule 0.308974
COL18A1 collagen, type XVIII, alpha 1 0.299242
UGT1A9 UDP glucuronosyltransferase 1 family, polypeptide A9 0.295655
IGHV3-30 immunoglobulin heavy variable 3-30 0.291365
UGT1A1 UDP glucuronosyltransferase 1 family, polypeptide A1 0.251606
LOX lysyl oxidase 0.247079
ACHE acetylcholinesterase (Yt blood group) 0.229568