glioblastoma Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0100843
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Genes

66 genes associated with the glioblastoma phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
SSBP2 single-stranded DNA binding protein 2 1.04365
USP10 ubiquitin specific peptidase 10 0.899912
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2 0.899912
KAT2B K(lysine) acetyltransferase 2B 0.882984
LINC00189 long intergenic non-protein coding RNA 189 0.868241
DCC DCC netrin 1 receptor 0.855449
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 0.846368
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 0.838165
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 0.834343
OGFRL1 opioid growth factor receptor-like 1 0.821408
FRMD8 FERM domain containing 8 0.819829
PCSK6 proprotein convertase subtilisin/kexin type 6 0.801631
IQSEC3 IQ motif and Sec7 domain 3 0.790435
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.788506
MAN1B1 mannosidase, alpha, class 1B, member 1 0.773374
SHROOM3 shroom family member 3 0.770746
LOC146513 uncharacterized LOC146513 0.770746
ZMYND15 zinc finger, MYND-type containing 15 0.764625
TTYH1 tweety family member 1 0.752816
LOC100507195 uncharacterized LOC100507195 0.750909
BTNL2 butyrophilin-like 2 0.73587
ALKBH6 alkB, alkylation repair homolog 6 (E. coli) 0.726891
DOCK1 dedicator of cytokinesis 1 0.72096
CLIP3 CAP-GLY domain containing linker protein 3 0.714303
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.711145
SCARB1 scavenger receptor class B, member 1 0.695366
PTPRO protein tyrosine phosphatase, receptor type, O 0.686028
PAQR5 progestin and adipoQ receptor family member V 0.685437
GPA33 glycoprotein A33 (transmembrane) 0.685142
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.681114
AIFM2 apoptosis-inducing factor, mitochondrion-associated, 2 0.677826
SP100 SP100 nuclear antigen 0.676017
GTSF1 gametocyte specific factor 1 0.667145
RNF168 ring finger protein 168, E3 ubiquitin protein ligase 0.665245
FAM13A family with sequence similarity 13, member A 0.66233
DPH6 diphthamine biosynthesis 6 0.660775
FOXP1 forkhead box P1 0.653106
MRPL23 mitochondrial ribosomal protein L23 0.653106
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.647367
PPA2 pyrophosphatase (inorganic) 2 0.633071
DLG2 discs, large homolog 2 (Drosophila) 0.615351
PARK2 parkin RBR E3 ubiquitin protein ligase 0.613645
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 0.613269
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3 0.612337
PITPNM3 PITPNM family member 3 0.611781
DOCK5 dedicator of cytokinesis 5 0.609228
CDH23 cadherin-related 23 0.606913
DGKI diacylglycerol kinase, iota 0.602943
TMEM222 transmembrane protein 222 0.602268
CEP128 centrosomal protein 128kDa 0.599613
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila) 0.593884
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive) 0.593267
GABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1 0.59159
AADACL3 arylacetamide deacetylase-like 3 0.590389
ARID1A AT rich interactive domain 1A (SWI-like) 0.585012
INSC inscuteable homolog (Drosophila) 0.583544
LOXHD1 lipoxygenase homology domains 1 0.581504
MARCH1 membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase 0.581268
MTHFR methylenetetrahydrofolate reductase (NAD(P)H) 0.579744
SLIT3 slit homolog 3 (Drosophila) 0.578934
MROH2A maestro heat-like repeat family member 2A 0.578475
RAI1 retinoic acid induced 1 0.578018
MTUS1 microtubule associated tumor suppressor 1 0.576214
ADGRB3 adhesion G protein-coupled receptor B3 0.576102
SASH1 SAM and SH3 domain containing 1 0.573794
ONECUT2 one cut homeobox 2 0.57293