facioscapulohumeral muscular dystrophy Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description OMIM mapping confirmed by DO. [SN]. (Human Disease Ontology, DOID_11727)
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Genes

125 genes co-occuring with the disease facioscapulohumeral muscular dystrophy in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
DUX4L6 double homeobox 4 like 6 2.8959
DUX4L8 double homeobox 4 like 8 2.76048
FRG1 FSHD region gene 1 2.50766
DUX4L9 double homeobox 4 like 9 2.10091
FRG2 FSHD region gene 2 2.04101
FRG2B FSHD region gene 2 family, member B 1.78714
PRR20E proline rich 20E 1.63993
PRR20C proline rich 20C 1.63993
TUBBP5 tubulin, beta pseudogene 5 1.63949
TUBBP1 tubulin, beta pseudogene 1 1.63949
PRR20A proline rich 20A 1.61441
DUXA double homeobox A 1.58002
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 1.5093
PDLIM3 PDZ and LIM domain 3 1.39214
FAM71B family with sequence similarity 71, member B 1.32803
TRIM43 tripartite motif containing 43 1.32803
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 1.29309
MYOD1 myogenic differentiation 1 1.27824
YAF2 YY1 associated factor 2 1.24385
MBD3L2 methyl-CpG binding domain protein 3-like 2 1.12572
EID2B EP300 interacting inhibitor of differentiation 2B 1.12572
SLC25A4 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 1.09083
PITX1 paired-like homeodomain 1 1.09041
CRYM crystallin, mu 1.08915
SNX25 sorting nexin 25 1.08034
DUX4L4 double homeobox 4 like 4 1.0606
ZSCAN4 zinc finger and SCAN domain containing 4 1.04546
HMGB2 high mobility group box 2 1.02482
MNX1 motor neuron and pancreas homeobox 1 0.968341
MURC muscle-related coiled-coil protein 0.95996
CAPN3 calpain 3, (p94) 0.93
MYF5 myogenic factor 5 0.897461
SORBS2 sorbin and SH3 domain containing 2 0.878605
SUV420H1 suppressor of variegation 4-20 homolog 1 (Drosophila) 0.828229
DMD dystrophin 0.813462
MIR32 microRNA 32 0.776568
HIST1H2AG histone cluster 1, H2ag 0.775341
LY86 lymphocyte antigen 86 0.759824
HELT helt bHLH transcription factor 0.716425
YY1 YY1 transcription factor 0.711587
ING2 inhibitor of growth family, member 2 0.703938
MYOG myogenin (myogenic factor 4) 0.700321
SUMF2 sulfatase modifying factor 2 0.689092
TNNT3 troponin T type 3 (skeletal, fast) 0.689092
MYH1 myosin, heavy chain 1, skeletal muscle, adult 0.669936
KLF15 Kruppel-like factor 15 0.651694
ADAM2 ADAM metallopeptidase domain 2 0.643404
ING3 inhibitor of growth family, member 3 0.632777
GZMA granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) 0.614747
ACTN2 actinin, alpha 2 0.606543
WNT9B wingless-type MMTV integration site family, member 9B 0.59874
NCL nucleolin 0.580439
PAX3 paired box 3 0.544705
HLTF helicase-like transcription factor 0.534248
FXR1 fragile X mental retardation, autosomal homolog 1 0.533088
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.526132
FHL1 four and a half LIM domains 1 0.52536
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta 0.514956
SLC22A3 solute carrier family 22 (organic cation transporter), member 3 0.504207
ST6GALNAC1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 0.485885
SNORA29 small nucleolar RNA, H/ACA box 29 0.481325
HIST1H4C histone cluster 1, H4c 0.472604
HIST1H4B histone cluster 1, H4b 0.472604
HIST1H4A histone cluster 1, H4a 0.472604
HIST1H4E histone cluster 1, H4e 0.472604
HIST1H4F histone cluster 1, H4f 0.472604
HIST2H4B histone cluster 2, H4b 0.472604
HIST1H4I histone cluster 1, H4i 0.472604
HIST1H4J histone cluster 1, H4j 0.472604
HIST1H4K histone cluster 1, H4k 0.472604
HIST1H4D histone cluster 1, H4d 0.472604
HIST1H4H histone cluster 1, H4h 0.472604
HIST2H4A histone cluster 2, H4a 0.471846
HIST1H4L histone cluster 1, H4l 0.470332
HIST4H4 histone cluster 4, H4 0.469954
ANK2 ankyrin 2, neuronal 0.467306
ANO5 anoctamin 5 0.466928
MIR107 microRNA 107 0.465038
MIR15B microRNA 15b 0.458996
F11 coagulation factor XI 0.458241
MIR25 microRNA 25 0.456732
MIR133B microRNA 133b 0.454847
PTRF polymerase I and transcript release factor 0.448817
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.438282
ETV5 ets variant 5 0.434899
FSCN1 fascin actin-bundling protein 1 0.434148
REV1 REV1, polymerase (DNA directed) 0.411657
MIR22 microRNA 22 0.398589
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.385936
CLCN3 chloride channel, voltage-sensitive 3 0.378885
IRF2 interferon regulatory factor 2 0.378885
MIR100 microRNA 100 0.377402
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.362978
H3F3B H3 histone, family 3B (H3.3B) 0.356341
H3F3A H3 histone, family 3A 0.356341
FAT1 FAT atypical cadherin 1 0.353763
TTN titin 0.344207
CCNA1 cyclin A1 0.342372
ROM1 retinal outer segment membrane protein 1 0.328834
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.317545
ETV1 ets variant 1 0.313915
CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2 0.309204
PMP22 peripheral myelin protein 22 0.302698
HEY1 hes-related family bHLH transcription factor with YRPW motif 1 0.293334
SNRPN small nuclear ribonucleoprotein polypeptide N 0.252774
EWSR1 EWS RNA-binding protein 1 0.244696
CLCN5 chloride channel, voltage-sensitive 5 0.235268
TRPV4 transient receptor potential cation channel, subfamily V, member 4 0.215653
FKRP fukutin related protein 0.214636
FGFR4 fibroblast growth factor receptor 4 0.211597
NTF4 neurotrophin 4 0.210589
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 0.210253
LUM lumican 0.205916
MIR223 microRNA 223 0.205585
ETV4 ets variant 4 0.204263
NXF1 nuclear RNA export factor 1 0.198386
NCAM1 neural cell adhesion molecule 1 0.188938
VCP valosin containing protein 0.188326
IGF2R insulin-like growth factor 2 receptor 0.174354
MYH7 myosin, heavy chain 7, cardiac muscle, beta 0.172291
FBXO32 F-box protein 32 0.164786
UTS2 urotensin 2 0.163111
PAX7 paired box 7 0.160203
FLI1 Fli-1 proto-oncogene, ETS transcription factor 0.158951
TOP3A topoisomerase (DNA) III alpha 0.157765