external encapsulating structure part Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Any constituent part of an external encapsulating structure, a structure that lies outside the plasma membrane and surrounds the entire cell. (Gene Ontology, GO_0044462)
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Genes

174 proteins co-occuring with the external encapsulating structure part cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
AGPS alkylglycerone phosphate synthase 2.10711
MANBA mannosidase, beta A, lysosomal 1.65393
CABYR calcium binding tyrosine-(Y)-phosphorylation regulated 1.33902
GNB1L guanine nucleotide binding protein (G protein), beta polypeptide 1-like 1.10562
FSCB fibrous sheath CABYR binding protein 1.099
GZMH granzyme H (cathepsin G-like 2, protein h-CCPX) 1.08171
ARAF A-Raf proto-oncogene, serine/threonine kinase 1.00054
EXT1 exostosin glycosyltransferase 1 0.914376
MEOX2 mesenchyme homeobox 2 0.746833
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.737813
ASPG asparaginase 0.733768
SLC44A2 solute carrier family 44 (choline transporter), member 2 0.731973
SLC6A16 solute carrier family 6, member 16 0.729732
SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 0.719015
METTL3 methyltransferase like 3 0.705273
SLC6A13 solute carrier family 6 (neurotransmitter transporter), member 13 0.695148
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.693393
SLC6A12 solute carrier family 6 (neurotransmitter transporter), member 12 0.680284
LSG1 large 60S subunit nuclear export GTPase 1 0.676368
LYZ lysozyme 0.674196
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 0.656033
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18 0.648291
SLC27A5 solute carrier family 27 (fatty acid transporter), member 5 0.637578
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20 0.63544
SLC6A17 solute carrier family 6 (neutral amino acid transporter), member 17 0.633305
XYLT2 xylosyltransferase II 0.623079
SLC6A15 solute carrier family 6 (neutral amino acid transporter), member 15 0.621379
SLC6A11 solute carrier family 6 (neurotransmitter transporter), member 11 0.613742
SLC6A5 solute carrier family 6 (neurotransmitter transporter), member 5 0.609086
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8 0.606128
ADGRL4 adhesion G protein-coupled receptor L4 0.600644
PGLYRP2 peptidoglycan recognition protein 2 0.563432
RPLP1 ribosomal protein, large, P1 0.544823
CELA1 chymotrypsin-like elastase family, member 1 0.539883
PIGY phosphatidylinositol glycan anchor biosynthesis, class Y 0.523476
GUSB glucuronidase, beta 0.519798
SULT4A1 sulfotransferase family 4A, member 1 0.516532
PTGDR prostaglandin D2 receptor (DP) 0.503506
USP4 ubiquitin specific peptidase 4 (proto-oncogene) 0.497826
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3 0.463997
PMM2 phosphomannomutase 2 0.450438
LMBRD1 LMBR1 domain containing 1 0.444482
ZFP36 ZFP36 ring finger protein 0.442104
NDST1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 0.438937
SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19 0.437356
PERP PERP, TP53 apoptosis effector 0.429072
TUBA1C tubulin, alpha 1c 0.42396
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.387751
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 0.386979
PPAN peter pan homolog (Drosophila) 0.375818
STRN striatin, calmodulin binding protein 0.368153
ACD adrenocortical dysplasia homolog (mouse) 0.363185
PCTP phosphatidylcholine transfer protein 0.361277
KIF15 kinesin family member 15 0.352142
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 0.333225
PYGB phosphorylase, glycogen; brain 0.332095
PYGL phosphorylase, glycogen, liver 0.331719
PYGM phosphorylase, glycogen, muscle 0.329461
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5) 0.325327
ATXN2 ataxin 2 0.324201
FCN3 ficolin (collagen/fibrinogen domain containing) 3 0.320826
DBT dihydrolipoamide branched chain transacylase E2 0.318205
GH2 growth hormone 2 0.315212
EBF1 early B-cell factor 1 0.309613
MGAT4C MGAT4 family, member C 0.30924
FER fer (fps/fes related) tyrosine kinase 0.306632
INVS inversin 0.304771
NOS3 nitric oxide synthase 3 (endothelial cell) 0.304399
SPN sialophorin 0.30254
KIFC1 kinesin family member C1 0.299569
TERF1 telomeric repeat binding factor (NIMA-interacting) 1 0.297713
VEGFA vascular endothelial growth factor A 0.297342
PTMS parathymosin 0.294007
DAZL deleted in azoospermia-like 0.293637
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 0.290308
MGAM maltase-glucoamylase 0.288091
PEX1 peroxisomal biogenesis factor 1 0.286983
FAM195A family with sequence similarity 195, member A 0.286614
LYST lysosomal trafficking regulator 0.282926
CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1 0.279612
CHL1 cell adhesion molecule L1-like 0.278141
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.277406
TUB tubby bipartite transcription factor 0.274101
KLK11 kallikrein-related peptidase 11 0.268969
AHCY adenosylhomocysteinase 0.258381
BLOC1S6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin 0.252202
KDR kinase insert domain receptor 0.251476
GALP galanin-like peptide 0.248578
DPT dermatopontin 0.245323
ADD1 adducin 1 (alpha) 0.242076
DAND5 DAN domain family member 5, BMP antagonist 0.239916
CALR calreticulin 0.238478
UGP2 UDP-glucose pyrophosphorylase 2 0.231315
TP53INP1 tumor protein p53 inducible nuclear protein 1 0.227397
IRF6 interferon regulatory factor 6 0.225976
MPG N-methylpurine-DNA glycosylase 0.21646
STAB2 stabilin 2 0.214714
PIDD1 p53-induced death domain protein 1 0.212627
POLDIP3 polymerase (DNA-directed), delta interacting protein 3 0.211587
HAND1 heart and neural crest derivatives expressed 1 0.198658
CRYGD crystallin, gamma D 0.198325
CSN1S1 casein alpha s1 0.196669
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.191456
PYCR1 pyrroline-5-carboxylate reductase 1 0.191135
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2 0.187646
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 0.183328
ISG15 ISG15 ubiquitin-like modifier 0.182122
CAPNS1 calpain, small subunit 1 0.179752
SPAG9 sperm associated antigen 9 0.17687
HBA1 hemoglobin, alpha 1 0.174635
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 0.172201
HBA2 hemoglobin, alpha 2 0.170629
C1QBP complement component 1, q subcomponent binding protein 0.170371
PRDX1 peroxiredoxin 1 0.169099
CEL carboxyl ester lipase 0.168101
SKAP2 src kinase associated phosphoprotein 2 0.165697
AXIN2 axin 2 0.16342
RTN4R reticulon 4 receptor 0.161693
CD82 CD82 molecule 0.156513
SLC6A7 solute carrier family 6 (neurotransmitter transporter), member 7 0.122481
SLC6A1 solute carrier family 6 (neurotransmitter transporter), member 1 0.120455
CARD17 caspase recruitment domain family, member 17 0.120161
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.118873
OAT ornithine aminotransferase 0.115529
TPX2 TPX2, microtubule-associated 0.113302
HLA-G major histocompatibility complex, class I, G 0.111578
CENPV centromere protein V 0.109898
TREH trehalase (brush-border membrane glycoprotein) 0.108559
COX5A cytochrome c oxidase subunit Va 0.108472
ANXA6 annexin A6 0.106349
HSPA1A heat shock 70kDa protein 1A 0.106287
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.105293
MYB v-myb avian myeloblastosis viral oncogene homolog 0.105033
CP ceruloplasmin (ferroxidase) 0.104952
RHEB Ras homolog enriched in brain 0.103557
ATN1 atrophin 1 0.103455
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 0.100363
NGFR nerve growth factor receptor 0.098175
TXN thioredoxin 0.095561
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.094727
SAG S-antigen; retina and pineal gland (arrestin) 0.094112
ADSL adenylosuccinate lyase 0.09306
VDAC1 voltage-dependent anion channel 1 0.090804
MYD88 myeloid differentiation primary response 88 0.090417
TUBA1A tubulin, alpha 1a 0.090394
HMGA2 high mobility group AT-hook 2 0.086032
HM13 histocompatibility (minor) 13 0.085791
TICAM2 toll-like receptor adaptor molecule 2 0.081867
RXRA retinoid X receptor, alpha 0.081385
MECOM MDS1 and EVI1 complex locus 0.080488
GH1 growth hormone 1 0.080205
GLA galactosidase, alpha 0.080205
HSPA4 heat shock 70kDa protein 4 0.080076
KLF10 Kruppel-like factor 10 0.079816
RPTOR regulatory associated protein of MTOR, complex 1 0.078933
MGP matrix Gla protein 0.078723
CSN2 casein beta 0.078645
CAV1 caveolin 1, caveolae protein, 22kDa 0.0764
SERPINA4 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4 0.075919
GCK glucokinase (hexokinase 4) 0.074442
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) 0.072784
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.072319
SDF4 stromal cell derived factor 4 0.071854
FLT1 fms-related tyrosine kinase 1 0.071221
FGF2 fibroblast growth factor 2 (basic) 0.071194
IL1B interleukin 1, beta 0.070782
G6PC glucose-6-phosphatase, catalytic subunit 0.070754
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.070671
VWF von Willebrand factor 0.07056
JUP junction plakoglobin 0.069286
FLG filaggrin 0.069202
LAP3 leucine aminopeptidase 3 0.068813
TSPO translocator protein (18kDa) 0.068646
ATF4 activating transcription factor 4 0.067642