exon-exon junction complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay. (Gene Ontology, GO_0035145)
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87 proteins co-occuring with the exon-exon junction complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
MAGOHB mago-nashi homolog B (Drosophila) 2.37309
MAGOH mago-nashi homolog, proliferation-associated (Drosophila) 2.36093
RNPS1 RNA binding protein S1, serine-rich domain 2.34241
EIF4A3 eukaryotic translation initiation factor 4A3 1.92438
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast) 1.89454
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast) 1.67022
UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast) 1.4069
RBM8A RNA binding motif protein 8A 1.28196
SREK1IP1 SREK1-interacting protein 1 1.27452
NCBP2 nuclear cap binding protein subunit 2, 20kDa 1.2387
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast) 1.20189
NXF1 nuclear RNA export factor 1 1.10256
POLR2J polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa 1.07461
C17ORF85 chromosome 17 open reading frame 85 1.0104
SLC45A3 solute carrier family 45, member 3 0.881938
DEK DEK proto-oncogene 0.876409
ELK4 ELK4, ETS-domain protein (SRF accessory protein 1) 0.855257
RAE1 ribonucleic acid export 1 0.809817
POLR2F polymerase (RNA) II (DNA directed) polypeptide F 0.800187
DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 0.800187
VNN1 vanin 1 0.778669
FBXL3 F-box and leucine-rich repeat protein 3 0.775014
MED8 mediator complex subunit 8 0.734666
ESRP1 epithelial splicing regulatory protein 1 0.669858
MSH3 mutS homolog 3 0.665096
BCLAF1 BCL2-associated transcription factor 1 0.641001
CKS2 CDC28 protein kinase regulatory subunit 2 0.638005
WIBG within bgcn homolog (Drosophila) 0.632024
NCOA4 nuclear receptor coactivator 4 0.622229
TPI1 triosephosphate isomerase 1 0.590553
SAP18 Sin3A-associated protein, 18kDa 0.588875
HRAS Harvey rat sarcoma viral oncogene homolog 0.575912
KLK2 kallikrein-related peptidase 2 0.572162
RGS12 regulator of G-protein signaling 12 0.567585
EIF4A2 eukaryotic translation initiation factor 4A2 0.561358
EIF4A1 eukaryotic translation initiation factor 4A1 0.560943
CASP5 caspase 5, apoptosis-related cysteine peptidase 0.5597
PABPN1 poly(A) binding protein, nuclear 1 0.542764
ATAD2 ATPase family, AAA domain containing 2 0.538238
UBN1 ubinuclein 1 0.533309
EIF4E eukaryotic translation initiation factor 4E 0.532078
STAU1 staufen double-stranded RNA binding protein 1 0.526341
SFTPA2 surfactant protein A2 0.515716
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 0.515308
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 0.4958
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.484079
ACIN1 apoptotic chromatin condensation inducer 1 0.474822
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.461199
PDE4B phosphodiesterase 4B, cAMP-specific 0.451233
PRPF8 pre-mRNA processing factor 8 0.444085
MAPRE2 microtubule-associated protein, RP/EB family, member 2 0.430647
NXT1 nuclear transport factor 2-like export factor 1 0.422782
PABPC1 poly(A) binding protein, cytoplasmic 1 0.418468
LARGE like-glycosyltransferase 0.409869
SHB Src homology 2 domain containing adaptor protein B 0.406361
HNRNPL heterogeneous nuclear ribonucleoprotein L 0.396648
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.386979
IL31RA interleukin 31 receptor A 0.363185
ETV6 ets variant 6 0.351002
KCNH2 potassium channel, voltage gated eag related subfamily H, member 2 0.348725
SFTPA1 surfactant protein A1 0.341907
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.341529
MSMB microseminoprotein, beta- 0.335487
NLGN1 neuroligin 1 0.325702
ALYREF Aly/REF export factor 0.319702
TMPRSS2 transmembrane protease, serine 2 0.317456
PRSS1 protease, serine, 1 (trypsin 1) 0.297342
PBX1 pre-B-cell leukemia homeobox 1 0.294378
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.293267
KLKB1 kallikrein B, plasma (Fletcher factor) 1 0.275936
TXNRD1 thioredoxin reductase 1 0.275936
PIDD1 p53-induced death domain protein 1 0.273734
NPB neuropeptide B 0.273367
EP300 E1A binding protein p300 0.255834
STMN2 stathmin 2 0.233101
POU5F1 POU class 5 homeobox 1 0.224558
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.210203
DROSHA drosha, ribonuclease type III 0.204378
ASXL1 additional sex combs like transcriptional regulator 1 0.194698
GPX1 glutathione peroxidase 1 0.194045
SNRPA small nuclear ribonucleoprotein polypeptide A 0.189222
NUTF2 nuclear transport factor 2 0.186397
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 0.183328
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha 0.183328
LINC00207 long intergenic non-protein coding RNA 207 0.176587
EIF4B eukaryotic translation initiation factor 4B 0.176024
CCND2 cyclin D2 0.167611