endosome lumen Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The volume enclosed by the membrane of an endosome. (Gene Ontology, GO_0031904)
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Genes

39 proteins co-occuring with the endosome lumen cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
ATP7B ATPase, Cu++ transporting, beta polypeptide 1.17876
SNX16 sorting nexin 16 1.09493
SLC15A3 solute carrier family 15 (oligopeptide transporter), member 3 1.03679
ATP7A ATPase, Cu++ transporting, alpha polypeptide 0.961667
PPAPDC2 phosphatidic acid phosphatase type 2 domain containing 2 0.932658
VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae) 0.905996
CLCN3 chloride channel, voltage-sensitive 3 0.824041
ERAP2 endoplasmic reticulum aminopeptidase 2 0.814864
CHMP5 charged multivesicular body protein 5 0.807524
SLC15A4 solute carrier family 15 (oligopeptide transporter), member 4 0.791022
SLC9A9 solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9 0.764527
CD207 CD207 molecule, langerin 0.756799
NPC1 Niemann-Pick disease, type C1 0.749546
NPC2 Niemann-Pick disease, type C2 0.725705
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae) 0.707482
VPS25 vacuolar protein sorting 25 homolog (S. cerevisiae) 0.700863
SLC9A6 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 0.638861
ACVR1B activin A receptor, type IB 0.632451
RIPK2 receptor-interacting serine-threonine kinase 2 0.621379
USE1 unconventional SNARE in the ER 1 homolog (S. cerevisiae) 0.581758
ELL elongation factor RNA polymerase II 0.575912
PSMB10 proteasome (prosome, macropain) subunit, beta type, 10 0.554732
CYBB cytochrome b-245, beta polypeptide 0.516124
VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) 0.486904
SORT1 sortilin 1 0.437356
NOD1 nucleotide-binding oligomerization domain containing 1 0.434985
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1 0.428678
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.390455
PARP1 poly (ADP-ribose) polymerase 1 0.388137
CD1D CD1d molecule 0.380814
VDAC1 voltage-dependent anion channel 1 0.319328
TSG101 tumor susceptibility 101 0.31596
NOD2 nucleotide-binding oligomerization domain containing 2 0.314465
LDLR low density lipoprotein receptor 0.294378
PCSK9 proprotein convertase subtilisin/kexin type 9 0.286245
IGF2R insulin-like growth factor 2 receptor 0.230245
DNAH8 dynein, axonemal, heavy chain 8 0.222083
LAMP2 lysosomal-associated membrane protein 2 0.186708
FURIN furin (paired basic amino acid cleaving enzyme) 0.182422