embryonic axis Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description The main root or shoot body of a seedling. The embryo of mature seeds of Pisum sativum consists of the embryonic axis and the cotyledons. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000380)
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Genes

136 proteins co-occuring with the tissue embryonic axis in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
WNT8A wingless-type MMTV integration site family, member 8A 1.556
CHRD chordin 1.49773
SETDB2 SET domain, bifurcated 2 1.39972
RIPPLY3 ripply transcriptional repressor 3 1.391
INTS6 integrator complex subunit 6 1.35268
VENTX VENT homeobox 1.24744
INTS1 integrator complex subunit 1 1.22024
SNRPA1 small nuclear ribonucleoprotein polypeptide A' 1.20022
TUBB1 tubulin, beta 1 class VI 1.15628
NAPRT nicotinate phosphoribosyltransferase 1.11199
LNX1 ligand of numb-protein X 1, E3 ubiquitin protein ligase 1.04752
ANKRD6 ankyrin repeat domain 6 1.03785
WLS wntless Wnt ligand secretion mediator 1.03522
CTNNA3 catenin (cadherin-associated protein), alpha 3 1.02469
TUBA4A tubulin, alpha 4a 1.00719
HINFP histone H4 transcription factor 1.00022
TPST1 tyrosylprotein sulfotransferase 1 0.997166
EIF3M eukaryotic translation initiation factor 3, subunit M 0.991944
METRN meteorin, glial cell differentiation regulator 0.988032
PRLHR prolactin releasing hormone receptor 0.98282
AXIN1 axin 1 0.95988
ADAR adenosine deaminase, RNA-specific 0.896895
CDX1 caudal type homeobox 1 0.891798
TUBG1 tubulin, gamma 1 0.879935
SPON2 spondin 2, extracellular matrix protein 0.877397
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.85547
MAST4 microtubule associated serine/threonine kinase family member 4 0.853788
WNT9A wingless-type MMTV integration site family, member 9A 0.846225
CDX4 caudal type homeobox 4 0.845805
WNT11 wingless-type MMTV integration site family, member 11 0.842447
WNT1 wingless-type MMTV integration site family, member 1 0.840349
BMPER BMP binding endothelial regulator 0.811891
GPC4 glypican 4 0.803544
QPRT quinolinate phosphoribosyltransferase 0.779816
AES amino-terminal enhancer of split 0.779401
FOXRED1 FAD-dependent oxidoreductase domain containing 1 0.776909
DKK1 dickkopf WNT signaling pathway inhibitor 1 0.774834
FRZB frizzled-related protein 0.774004
SPON1 spondin 1, extracellular matrix protein 0.773174
GUSB glucuronidase, beta 0.769441
CENPV centromere protein V 0.766125
TLE4 transducin-like enhancer of split 4 0.758673
MARCKSL1 MARCKS-like 1 0.75371
LEFTY1 left-right determination factor 1 0.751645
ANTXR2 anthrax toxin receptor 2 0.74009
MNX1 motor neuron and pancreas homeobox 1 0.733912
FOXI1 forkhead box I1 0.729797
TBX4 T-box 4 0.714189
HOXB8 homeobox B8 0.713779
WNT8B wingless-type MMTV integration site family, member 8B 0.712139
SHH sonic hedgehog 0.703945
HOXC8 homeobox C8 0.693311
TUBB tubulin, beta class I 0.682287
BMP4 bone morphogenetic protein 4 0.677803
PAX1 paired box 1 0.660304
FGF1 fibroblast growth factor 1 (acidic) 0.659491
LEFTY2 left-right determination factor 2 0.649749
VANGL2 VANGL planar cell polarity protein 2 0.627485
DYNLL1 dynein, light chain, LC8-type 1 0.6182
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.613361
TGFB1 transforming growth factor, beta 1 0.609735
YAP1 Yes-associated protein 1 0.604502
FZD2 frizzled class receptor 2 0.601686
EVL Enah/Vasp-like 0.600479
SNORA29 small nucleolar RNA, H/ACA box 29 0.593649
STAU1 staufen double-stranded RNA binding protein 1 0.585224
HNF4A hepatocyte nuclear factor 4, alpha 0.579617
DCPS decapping enzyme, scavenger 0.56005
ACO1 aconitase 1, soluble 0.558457
FZD4 frizzled class receptor 4 0.556865
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 0.555671
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1 0.547326
FGF8 fibroblast growth factor 8 (androgen-induced) 0.545739
CD3E CD3e molecule, epsilon (CD3-TCR complex) 0.540585
FGF4 fibroblast growth factor 4 0.534251
ACSL1 acyl-CoA synthetase long-chain family member 1 0.531879
RYR3 ryanodine receptor 3 0.528719
HOXA5 homeobox A5 0.528323
PCDH11Y protocadherin 11 Y-linked 0.527139
NOG noggin 0.525166
TP53INP1 tumor protein p53 inducible nuclear protein 1 0.520829
PCDH11X protocadherin 11 X-linked 0.513743
FOXM1 forkhead box M1 0.481259
PPP6C protein phosphatase 6, catalytic subunit 0.476201
PPP5C protein phosphatase 5, catalytic subunit 0.46766
PPP3CC protein phosphatase 3, catalytic subunit, gamma isozyme 0.466498
KLK15 kallikrein-related peptidase 15 0.464174
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme 0.463013
SGPL1 sphingosine-1-phosphate lyase 1 0.458759
SOX3 SRY (sex determining region Y)-box 3 0.456442
PPEF1 protein phosphatase, EF-hand calcium binding domain 1 0.451813
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.446422
SYBU syntabulin (syntaxin-interacting) 0.444115
EN2 engrailed homeobox 2 0.438739
PPP3CB protein phosphatase 3, catalytic subunit, beta isozyme 0.435672
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme 0.423054
WNT2 wingless-type MMTV integration site family member 2 0.420004
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.41087
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 0.410491
JMJD6 jumonji domain containing 6 0.405176
FZD1 frizzled class receptor 1 0.398735
TBX5 T-box 5 0.396087
EN1 engrailed homeobox 1 0.388912
PPP4C protein phosphatase 4, catalytic subunit 0.38665
MARS methionyl-tRNA synthetase 0.384766
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.383637
ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 0.381379
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 0.377245
AOX1 aldehyde oxidase 1 0.373118
ZEB2 zinc finger E-box binding homeobox 2 0.36526
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme 0.356314
AXIN2 axin 2 0.348889
RAP2B RAP2B, member of RAS oncogene family 0.341495
RAB1B RAB1B, member RAS oncogene family 0.341126
KAT2B K(lysine) acetyltransferase 2B 0.338545
SAR1A secretion associated, Ras related GTPase 1A 0.338545
ARF3 ADP-ribosylation factor 3 0.336704
PITX2 paired-like homeodomain 2 0.327896
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 0.32132
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.315861
PNMA2 paraneoplastic Ma antigen 2 0.303198
HESX1 HESX homeobox 1 0.293508
MAEA macrophage erythroblast attacher 0.283545
JUP junction plakoglobin 0.280364
PSENEN presenilin enhancer gamma secretase subunit 0.276846
EEF2 eukaryotic translation elongation factor 2 0.276846
PLK1 polo-like kinase 1 0.264353
COL2A1 collagen, type II, alpha 1 0.263327
OTX2 orthodenticle homeobox 2 0.260606
WNT5A wingless-type MMTV integration site family, member 5A 0.260606
MSX1 msh homeobox 1 0.259929
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.241438
ZEB1 zinc finger E-box binding homeobox 1 0.231482
MAPK9 mitogen-activated protein kinase 9 0.230931
FN1 fibronectin 1 0.220152
CCL19 chemokine (C-C motif) ligand 19 0.214765