dorsal raphe nucleus Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description A large raphe nucleus extending from the anterior part of the pons through the mesencephalon; its neurons are serotoninergic. (BRENDA Tissue and Enzyme Source Ontology, BTO_0002434)
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Genes

153 proteins co-occuring with the tissue dorsal raphe nucleus in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled 3.08772
TPH1 tryptophan hydroxylase 1 2.46457
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 2.21298
TPH2 tryptophan hydroxylase 2 2.07814
FOS FBJ murine osteosarcoma viral oncogene homolog 1.96884
CRH corticotropin releasing hormone 1.63306
GAL galanin/GMAP prepropeptide 1.54681
TH tyrosine hydroxylase 1.53622
HCRT hypocretin (orexin) neuropeptide precursor 1.43246
CRHR1 corticotropin releasing hormone receptor 1 1.41307
TAC1 tachykinin, precursor 1 1.37453
GALR3 galanin receptor 3 1.33907
HTR3A 5-hydroxytryptamine (serotonin) receptor 3A, ionotropic 1.33591
UCN2 urocortin 2 1.30703
LHB luteinizing hormone beta polypeptide 1.28053
NTS neurotensin 1.26173
PNOC prepronociceptin 1.2296
CRHR2 corticotropin releasing hormone receptor 2 1.14786
GALR2 galanin receptor 2 1.14298
TACR1 tachykinin receptor 1 1.11774
CRIPAK cysteine-rich PAK1 inhibitor 1.05765
CHAT choline O-acetyltransferase 1.0484
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 1.02118
MAOA monoamine oxidase A 1.00894
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 0.977616
SLC17A8 solute carrier family 17 (vesicular glutamate transporter), member 8 0.955565
TAAR1 trace amine associated receptor 1 0.948239
FEV FEV (ETS oncogene family) 0.942215
MCHR2 melanin-concentrating hormone receptor 2 0.896045
PDYN prodynorphin 0.889253
CC2D1B coiled-coil and C2 domain containing 1B 0.879089
NPBWR1 neuropeptides B/W receptor 1 0.873594
POMC proopiomelanocortin 0.872749
CDC5L cell division cycle 5-like 0.859258
UCN urocortin 0.856312
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 0.839091
OPRL1 opiate receptor-like 1 0.835737
CCK cholecystokinin 0.834899
HCRTR1 hypocretin (orexin) receptor 1 0.831129
NPS neuropeptide S 0.831129
NPY neuropeptide Y 0.81774
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 0.760328
WIZ widely interspaced zinc finger motifs 0.760328
LPGAT1 lysophosphatidylglycerol acyltransferase 1 0.757432
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1 0.748753
CGA glycoprotein hormones, alpha polypeptide 0.746689
HTR5A 5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled 0.729385
OPRM1 opioid receptor, mu 1 0.718703
SV2B synaptic vesicle glycoprotein 2B 0.710909
MCHR1 melanin-concentrating hormone receptor 1 0.676987
GALR1 galanin receptor 1 0.672913
HTR2C 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled 0.651371
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7 0.647721
CNR1 cannabinoid receptor 1 (brain) 0.64529
SLC17A6 solute carrier family 17 (vesicular glutamate transporter), member 6 0.638809
DLEU2L deleted in lymphocytic leukemia 2-like 0.627081
SLC18A2 solute carrier family 18 (vesicular monoamine transporter), member 2 0.627081
GAD1 glutamate decarboxylase 1 (brain, 67kDa) 0.619814
STK38 serine/threonine kinase 38 0.617796
ESR2 estrogen receptor 2 (ER beta) 0.607319
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) 0.598469
GCHFR GTP cyclohydrolase I feedback regulator 0.597263
NPW neuropeptide W 0.596058
MAOB monoamine oxidase B 0.564035
RLN3 relaxin 3 0.558856
PVALB parvalbumin 0.554876
TROVE2 TROVE domain family, member 2 0.549709
EHMT2 euchromatic histone-lysine N-methyltransferase 2 0.546929
FAAH fatty acid amide hydrolase 0.538604
PNMT phenylethanolamine N-methyltransferase 0.52635
APLNR apelin receptor 0.520829
CC2D1A coiled-coil and C2 domain containing 1A 0.516891
MAGEC1 melanoma antigen family C1 0.510206
CALB1 calbindin 1, 28kDa 0.483596
FECH ferrochelatase 0.483206
BDNF brain-derived neurotrophic factor 0.481648
MEA1 male-enhanced antigen 1 0.474646
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 0.471151
ESR1 estrogen receptor 1 0.463013
UCN3 urocortin 3 0.462626
NPB neuropeptide B 0.461852
NPFF neuropeptide FF-amide peptide precursor 0.460692
CCKBR cholecystokinin B receptor 0.450657
RGS14 regulator of G-protein signaling 14 0.437205
OXT oxytocin/neurophysin I prepropeptide 0.43414
TRH thyrotropin-releasing hormone 0.43146
OPRK1 opioid receptor, kappa 1 0.428401
SST somatostatin 0.423054
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2 0.409351
QRFPR pyroglutamylated RFamide peptide receptor 0.408212
REN renin 0.404797
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 0.404039
AURKAIP1 aurora kinase A interacting protein 1 0.398357
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.394576
LEPR leptin receptor 0.38439
PGLYRP3 peptidoglycan recognition protein 3 0.379499
NMB neuromedin B 0.379123
BCS1L BC1 (ubiquinol-cytochrome c reductase) synthesis-like 0.374618
EFHD1 EF-hand domain family, member D1 0.373118
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3 0.370496
ACRBP acrosin binding protein 0.369747
MSH4 mutS homolog 4 0.36825
TXNL4B thioredoxin-like 4B 0.366381
ECEL1 endothelin converting enzyme-like 1 0.36526
RGS4 regulator of G-protein signaling 4 0.36526
CRCP CGRP receptor component 0.361901
SLC6A15 solute carrier family 6 (neutral amino acid transporter), member 15 0.360036
OXR1 oxidation resistance 1 0.356314
AVP arginine vasopressin 0.348148
CORT cortistatin 0.345928
IDO1 indoleamine 2,3-dioxygenase 1 0.344449
COX5A cytochrome c oxidase subunit Va 0.340019
KCNJ9 potassium channel, inwardly rectifying subfamily J, member 9 0.33965
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.338545
RGS19 regulator of G-protein signaling 19 0.336336
FSCN1 fascin actin-bundling protein 1 0.336336
THEM5 thioesterase superfamily member 5 0.331927
ZNF347 zinc finger protein 347 0.328262
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.326432
GYPE glycophorin E (MNS blood group) 0.323144
DEAF1 DEAF1 transcription factor 0.320956
LIMK2 LIM domain kinase 2 0.320227
EN1 engrailed homeobox 1 0.314046
PENK proenkephalin 0.307528
ACHE acetylcholinesterase (Yt blood group) 0.30464
PRL prolactin 0.303919
LHX8 LIM homeobox 8 0.303198
TFIP11 tuftelin interacting protein 11 0.291365
UST uronyl-2-sulfotransferase 0.288514
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 0.286381
PORCN porcupine homolog (Drosophila) 0.283191
RGS16 regulator of G-protein signaling 16 0.281423
TADA1 transcriptional adaptor 1 0.280364
SGCE sarcoglycan, epsilon 0.280012
CYLD cylindromatosis (turban tumor syndrome) 0.276495
CARTPT CART prepropeptide 0.275444
TRIM37 tripartite motif containing 37 0.269867
BAIAP2 BAI1-associated protein 2 0.268482
OPN4 opsin 4 0.260945
RGS1 regulator of G-protein signaling 1 0.257237
SCN3A sodium channel, voltage gated, type III alpha subunit 0.247399
NUCB2 nucleobindin 2 0.229299
TAC3 tachykinin 3 0.229032
TMEM245 transmembrane protein 245 0.227186
NPPA natriuretic peptide A 0.2259
DLL1 delta-like 1 (Drosophila) 0.2259
TACSTD2 tumor-associated calcium signal transducer 2 0.222224
HTR1B 5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled 0.220831
GCH1 GTP cyclohydrolase 1 0.220378
NMUR2 neuromedin U receptor 2 0.216528
CALCA calcitonin-related polypeptide alpha 0.214954
LGALS1 lectin, galactoside-binding, soluble, 1 0.214765
HDLBP high density lipoprotein binding protein 0.213833