diabetic retinopathy Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:8947
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Genes

96 genes associated with the disease diabetic retinopathy in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
KIAA0825 KIAA0825 1.81431
HS6ST3 heparan sulfate 6-O-sulfotransferase 3 1.59609
ARHGAP22 Rho GTPase activating protein 22 1.48714
LOC339529 uncharacterized LOC339529 1.31635
PLXDC2 plexin domain containing 2 1.26953
MYSM1 Myb-like, SWIRM and MPN domains 1 1.26953
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 1.26953
TBC1D4 TBC1 domain family, member 4 1.24952
LMO7 LIM domain 7 1.24313
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 1.23034
VEPH1 ventricular zone expressed PH domain-containing 1 1.12155
INSR insulin receptor 1.10764
CCDC101 coiled-coil domain containing 101 1.10419
NUPR1 nuclear protein, transcriptional regulator, 1 1.10088
LOC100506023 uncharacterized LOC100506023 1.07599
OSCP1 organic solute carrier partner 1 1.07599
COMMD6 COMM domain containing 6 1.07307
TVP23B trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) 1.0538
ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase 1.00788
CREB5 cAMP responsive element binding protein 5 1.00407
PCSK2 proprotein convertase subtilisin/kexin type 2 1.00039
MALRD1 MAM and LDL receptor class A domain containing 1 0.984747
SULT1A2 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2 0.976976
AKAP11 A kinase (PRKA) anchor protein 11 0.960778
SPAG16 sperm associated antigen 16 0.958374
KRT74 keratin 74, type II 0.947208
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 0.947208
USP5 ubiquitin specific peptidase 5 (isopeptidase T) 0.920453
GNB3 guanine nucleotide binding protein (G protein), beta polypeptide 3 0.920453
LINC00477 long intergenic non-protein coding RNA 477 0.912987
LHFP lipoma HMGIC fusion partner 0.898875
TPI1 triosephosphate isomerase 1 0.886521
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.839855
HDAC4 histone deacetylase 4 0.839855
LRRC23 leucine rich repeat containing 23 0.839855
TSNARE1 t-SNARE domain containing 1 0.823134
FRMD4B FERM domain containing 4B 0.823134
SVIL supervillin 0.823134
PDE4B phosphodiesterase 4B, cAMP-specific 0.819144
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.811614
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.801304
PACRG PARK2 co-regulated 0.794247
NPSR1 neuropeptide S receptor 1 0.790866
PTPRT protein tyrosine phosphatase, receptor type, T 0.78442
CEP135 centrosomal protein 135kDa 0.775452
WDR63 WD repeat domain 63 0.775452
GRM7 glutamate receptor, metabotropic 7 0.772631
COL5A1 collagen, type V, alpha 1 0.772631
FAM134B family with sequence similarity 134, member B 0.766993
PIK3R5 phosphoinositide-3-kinase, regulatory subunit 5 0.766993
PSORS1C2 psoriasis susceptibility 1 candidate 2 0.764084
SLC9A9 solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9 0.758489
CNTN1 contactin 1 0.758489
PBX1 pre-B-cell leukemia homeobox 1 0.753174
CAMK4 calcium/calmodulin-dependent protein kinase IV 0.744709
SERPINF2 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2 0.736436
FMN1 formin 1 0.729592
SNTG1 syntrophin, gamma 1 0.729362
SLIT3 slit homolog 3 (Drosophila) 0.729362
VWA8 von Willebrand factor A domain containing 8 0.727087
RPTOR regulatory associated protein of MTOR, complex 1 0.727087
EGFR epidermal growth factor receptor 0.724858
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.720532
EPHB1 EPH receptor B1 0.714351
ZNF622 zinc finger protein 622 0.71042
NOD1 nucleotide-binding oligomerization domain containing 1 0.708319
SGSM2 small G protein signaling modulator 2 0.70663
PCDH9 protocadherin 9 0.704784
ZBTB41 zinc finger and BTB domain containing 41 0.701191
ASIC2 acid sensing (proton gated) ion channel 2 0.701191
LTBP1 latent transforming growth factor beta binding protein 1 0.69773
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 0.694381
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.692747
GDNF glial cell derived neurotrophic factor 0.689554
FAM204A family with sequence similarity 204, member A 0.687994
KLHL29 kelch-like family member 29 0.687994
NID1 nidogen 1 0.686457
COL19A1 collagen, type XIX, alpha 1 0.67359
JAKMIP1 janus kinase and microtubule interacting protein 1 0.67359
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.631872
LOC349160 uncharacterized LOC349160 0.62609
ALMS1 Alstrom syndrome protein 1 0.598827
SULF1 sulfatase 1 0.591882
NCKAP5 NCK-associated protein 5 0.560351
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.557583
ADGRL3 adhesion G protein-coupled receptor L3 0.556685
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.544787
IL12RB2 interleukin 12 receptor, beta 2 0.543055
CNTN5 contactin 5 0.54031
CDH13 cadherin 13 0.539566
OTOGL otogelin-like 0.537384
NPAS3 neuronal PAS domain protein 3 0.522634
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae) 0.518495
AAK1 AP2 associated kinase 1 0.514091
NRG3 neuregulin 3 0.507466
CCDC102B coiled-coil domain containing 102B 0.500225