dental plaque Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description A soft, thin film of food debris, mucin, and dead epithelial cells deposited on the teeth, providing the medium for the growth of various bacteria. The main inorganic components are calcium and phosphorus, with small amounts of magnesium, potassium, and sodium; the organic matrix consists of polysaccharides, proteins, carbohydrates, lipids, and other components. Plaque plays an important etiologic role in the development of dental caries and periodontal and gingival diseases and provides the base for the development of materia alba; calcified plaque forms dental calculus. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000338)
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Genes

105 proteins co-occuring with the tissue dental plaque in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 1.82657
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 1.82452
SERPINF2 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2 1.70097
GPI glucose-6-phosphate isomerase 1.48739
AMY1C amylase, alpha 1C (salivary) 1.47709
AMY1B amylase, alpha 1B (salivary) 1.47709
AMY1A amylase, alpha 1A (salivary) 1.47615
LPO lactoperoxidase 1.44682
CD79A CD79a molecule, immunoglobulin-associated alpha 1.34995
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 1.34315
LYZ lysozyme 1.202
CNOT8 CCR4-NOT transcription complex, subunit 8 1.13634
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 1.10889
KLK11 kallikrein-related peptidase 11 1.03434
LTF lactotransferrin 1.02162
CSN1S1 casein alpha s1 0.981084
ADSL adenylosuccinate lyase 0.907535
MMP8 matrix metallopeptidase 8 0.851686
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 0.83951
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.834899
CAT catalase 0.831547
PROL1 proline rich, lacrimal 1 0.822339
CA6 carbonic anhydrase VI 0.81983
STATH statherin 0.773589
DLL1 delta-like 1 (Drosophila) 0.767783
ALB albumin 0.75371
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa 0.732677
IL1B interleukin 1, beta 0.696172
MCM8 minichromosome maintenance complex component 8 0.659085
NT5M 5',3'-nucleotidase, mitochondrial 0.647316
CTSC cathepsin C 0.631527
SERP1 stress-associated endoplasmic reticulum protein 1 0.624254
ZBTB48 zinc finger and BTB domain containing 48 0.608527
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.593247
GALP galanin-like peptide 0.587228
DMBT1 deleted in malignant brain tumors 1 0.575616
MMP9 matrix metallopeptidase 9 0.571219
FN1 fibronectin 1 0.57082
CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 0.567227
TSPO translocator protein (18kDa) 0.547326
UPK1A uroplakin 1A 0.547326
FMO3 flavin containing monooxygenase 3 0.544946
GANAB glucosidase, alpha; neutral AB 0.533856
LAP3 leucine aminopeptidase 3 0.520829
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 0.517678
ALPPL2 alkaline phosphatase, placental-like 2 0.515317
ALPL alkaline phosphatase, liver/bone/kidney 0.51453
ALPP alkaline phosphatase, placental 0.513743
CTRL chymotrypsin-like 0.510206
DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 0.506279
CST4 cystatin S 0.505495
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1 0.492182
CXCL8 chemokine (C-X-C motif) ligand 8 0.475034
CTSG cathepsin G 0.471539
DEDD death effector domain containing 0.46766
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa 0.463013
CRP C-reactive protein, pentraxin-related 0.444499
ACPP acid phosphatase, prostate 0.443347
GSAP gamma-secretase activating protein 0.44181
CAMP cathelicidin antimicrobial peptide 0.44181
GZMK granzyme K (granzyme 3; tryptase II) 0.43989
ARHGEF16 Rho guanine nucleotide exchange factor (GEF) 16 0.404039
PLG plasminogen 0.40025
IGHV3-30 immunoglobulin heavy variable 3-30 0.393819
HSPB7 heat shock 27kDa protein family, member 7 (cardiovascular) 0.383637
ICT1 immature colon carcinoma transcript 1 0.382131
TNF tumor necrosis factor 0.36526
MUL1 mitochondrial E3 ubiquitin protein ligase 1 0.363393
ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1 0.36302
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 0.360782
MAGEC1 melanoma antigen family C1 0.354455
LSR lipolysis stimulated lipoprotein receptor 0.35334
LOX lysyl oxidase 0.345558
OCM2 oncomodulin 2 0.338545
OCM oncomodulin 0.334865
HAND2 heart and neural crest derivatives expressed 2 0.328994
HVCN1 hydrogen voltage gated channel 1 0.326067
PGK1 phosphoglycerate kinase 1 0.324605
DCSTAMP dendrocyte expressed seven transmembrane protein 0.323874
ALYREF Aly/REF export factor 0.323509
ZNF77 zinc finger protein 77 0.322779
HM13 histocompatibility (minor) 13 0.318407
SOD2 superoxide dismutase 2, mitochondrial 0.318042
OR10A4 olfactory receptor, family 10, subfamily A, member 4 0.317679
ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2 0.31187
GALK1 galactokinase 1 0.311507
DPP4 dipeptidyl-peptidase 4 0.307889
PGAM2 phosphoglycerate mutase 2 (muscle) 0.292793
DNAH8 dynein, axonemal, heavy chain 8 0.291365
RRM2 ribonucleotide reductase M2 0.283545
NAGA N-acetylgalactosaminidase, alpha- 0.274045
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble 0.273346
PGAM1 phosphoglycerate mutase 1 (brain) 0.271256
NOVA2 neuro-oncological ventral antigen 2 0.266069
BPGM 2,3-bisphosphoglycerate mutase 0.264353
SDF4 stromal cell derived factor 4 0.262645
UGP2 UDP-glucose pyrophosphorylase 2 0.250627
MMP2 matrix metallopeptidase 2 0.24676
S100A9 S100 calcium binding protein A9 0.244545
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.241746
IL12B interleukin 12B 0.232881
ICAM1 intercellular adhesion molecule 1 0.222938
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.21883
PLAT plasminogen activator, tissue 0.216528
FICD FIC domain containing 0.215147