deep Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

169 genes co-occuring with the biological term deep in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ACE angiotensin I converting enzyme
ACHE acetylcholinesterase (Yt blood group)
ADAM10 ADAM metallopeptidase domain 10
ADAM12 ADAM metallopeptidase domain 12
ADAM17 ADAM metallopeptidase domain 17
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADIPOQ adiponectin, C1Q and collagen domain containing
ADORA2A adenosine A2a receptor
AGER advanced glycosylation end product-specific receptor
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALK anaplastic lymphoma receptor tyrosine kinase
ANXA5 annexin A5
APC adenomatous polyposis coli
APOA1 apolipoprotein A-I
APOB apolipoprotein B
APOE apolipoprotein E
ARID1A AT rich interactive domain 1A (SWI-like)
ASCL1 achaete-scute family bHLH transcription factor 1
BAX BCL2-associated X protein
BCL2 B-cell CLL/lymphoma 2
BDNF brain-derived neurotrophic factor
BRCA2 breast cancer 2, early onset
C3 complement component 3
C9 complement component 9
CARD9 caspase recruitment domain family, member 9
CCL2 chemokine (C-C motif) ligand 2
CCL5 chemokine (C-C motif) ligand 5
CCR1 chemokine (C-C motif) receptor 1
CCT2 chaperonin containing TCP1, subunit 2 (beta)
CD44 CD44 molecule (Indian blood group)
CD59 CD59 molecule, complement regulatory protein
CDH2 cadherin 2, type 1, N-cadherin (neuronal)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CHEK2 checkpoint kinase 2
COL4A5 collagen, type IV, alpha 5
CRP C-reactive protein, pentraxin-related
CST3 cystatin C
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTTN cortactin
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL8 chemokine (C-X-C motif) ligand 8
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2
DEK DEK proto-oncogene
DMD dystrophin
DPP4 dipeptidyl-peptidase 4
DPYD dihydropyrimidine dehydrogenase
DRD2 dopamine receptor D2
EGFR epidermal growth factor receptor
ELAVL1 ELAV like RNA binding protein 1
EPCAM epithelial cell adhesion molecule
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
F11 coagulation factor XI
F13A1 coagulation factor XIII, A1 polypeptide
F2 coagulation factor II (thrombin)
F3 coagulation factor III (thromboplastin, tissue factor)
F5 coagulation factor V (proaccelerin, labile factor)
F8 coagulation factor VIII, procoagulant component
F9 coagulation factor IX
FAF1 Fas (TNFRSF6) associated factor 1
FECH ferrochelatase
FGA fibrinogen alpha chain
FGG fibrinogen gamma chain
FOXF1 forkhead box F1
FOXP1 forkhead box P1
FST follistatin
GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class)
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GP6 glycoprotein VI (platelet)
HADH hydroxyacyl-CoA dehydrogenase
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HRAS Harvey rat sarcoma viral oncogene homolog
IL10 interleukin 10
IL17RA interleukin 17 receptor A
IL18 interleukin 18
IL1B interleukin 1, beta
IL1RN interleukin 1 receptor antagonist
IL23A interleukin 23, alpha subunit p19
IL6 interleukin 6
INHBA inhibin, beta A
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
JAK2 Janus kinase 2
KCNA5 potassium channel, voltage gated shaker related subfamily A, member 5
KCNAB1 potassium channel, voltage gated subfamily A regulatory beta subunit 1
KCND3 potassium channel, voltage gated Shal related subfamily D, member 3
LIPG lipase, endothelial
LRRK2 leucine-rich repeat kinase 2
LTF lactotransferrin
MEFV Mediterranean fever
MKI67 marker of proliferation Ki-67
MMP12 matrix metallopeptidase 12
MMP13 matrix metallopeptidase 13
MMP2 matrix metallopeptidase 2
MMP26 matrix metallopeptidase 26
MMP3 matrix metallopeptidase 3
MMP7 matrix metallopeptidase 7
MMP9 matrix metallopeptidase 9
MT-ATP6 ATP synthase F0 subunit 6
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTM1 myotubularin 1
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MUC2 mucin 2, oligomeric mucus/gel-forming
MUC5AC mucin 5AC, oligomeric mucus/gel-forming
MUC6 mucin 6, oligomeric mucus/gel-forming
NCSTN nicastrin
NEFL neurofilament, light polypeptide
NF2 neurofibromin 2 (merlin)
NFIB nuclear factor I/B
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NOS2 nitric oxide synthase 2, inducible
NOS3 nitric oxide synthase 3 (endothelial cell)
NOTCH3 notch 3
NPY neuropeptide Y
OFD1 oral-facial-digital syndrome 1
P2RY12 purinergic receptor P2Y, G-protein coupled, 12
PARK2 parkin RBR E3 ubiquitin protein ligase
PARP1 poly (ADP-ribose) polymerase 1
PAX6 paired box 6
PDCD5 programmed cell death 5
PF4 platelet factor 4
PGR progesterone receptor
PINK1 PTEN induced putative kinase 1
PLG plasminogen
PMM2 phosphomannomutase 2
POLG polymerase (DNA directed), gamma
PRKCH protein kinase C, eta
PRNP prion protein
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PROCR protein C receptor, endothelial
PROS1 protein S (alpha)
PTGIR prostaglandin I2 (prostacyclin) receptor (IP)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
RAB7A RAB7A, member RAS oncogene family
RB1 retinoblastoma 1
RBM20 RNA binding motif protein 20
RUNX2 runt-related transcription factor 2
S100B S100 calcium binding protein B
SCN8A sodium channel, voltage gated, type VIII alpha subunit
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SFRP4 secreted frizzled-related protein 4
SGCE sarcoglycan, epsilon
SLC12A3 solute carrier family 12 (sodium/chloride transporter), member 3
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8
SMYD3 SET and MYND domain containing 3
SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like
SPECC1L-ADORA2A SPECC1L-ADORA2A readthrough (NMD candidate)
SRSF1 serine/arginine-rich splicing factor 1
TET2 tet methylcytosine dioxygenase 2
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TFPI2 tissue factor pathway inhibitor 2
TGFB1 transforming growth factor, beta 1
TGFBI transforming growth factor, beta-induced, 68kDa
THAP1 THAP domain containing, apoptosis associated protein 1
THBD thrombomodulin
TNF tumor necrosis factor
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TOR1A torsin family 1, member A (torsin A)
UNC13D unc-13 homolog D (C. elegans)
USH2A Usher syndrome 2A (autosomal recessive, mild)
VEGFA vascular endothelial growth factor A
VKORC1 vitamin K epoxide reductase complex, subunit 1
WRN Werner syndrome, RecQ helicase-like
WT1 Wilms tumor 1