condensed chromosome Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. (Gene Ontology, GO_0000793)
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Genes

160 proteins localized to the condensed chromosome cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
HMGB2 high mobility group box 2 0.663342
CENPU centromere protein U 0.663342
CENPT centromere protein T 0.663342
SPAG5 sperm associated antigen 5 0.663342
ITGB3BP integrin beta 3 binding protein (beta3-endonexin) 0.663342
KIF2C kinesin family member 2C 0.663342
PLK1 polo-like kinase 1 0.663342
SMC1A structural maintenance of chromosomes 1A 0.663342
SMC1B structural maintenance of chromosomes 1B 0.663342
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 0.663342
SGOL1 shugoshin-like 1 (S. pombe) 0.663342
SGOL2 shugoshin-like 2 (S. pombe) 0.663342
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 0.663342
CENPV centromere protein V 0.663342
CENPW centromere protein W 0.663342
CENPE centromere protein E, 312kDa 0.663342
HMGB1 high mobility group box 1 0.663342
ERCC6L excision repair cross-complementation group 6-like 0.663342
MIS12 MIS12 kinetochore complex component 0.663342
CLASP2 cytoplasmic linker associated protein 2 0.663342
SMC4 structural maintenance of chromosomes 4 0.663342
TPR translocated promoter region, nuclear basket protein 0.663342
CENPO centromere protein O 0.663342
CENPN centromere protein N 0.663342
CENPM centromere protein M 0.663342
CENPK centromere protein K 0.663342
CENPH centromere protein H 0.663342
CENPF centromere protein F, 350/400kDa 0.663342
KNSTRN kinetochore-localized astrin/SPAG5 binding protein 0.663342
PMF1 polyamine-modulated factor 1 0.663342
BIRC5 baculoviral IAP repeat containing 5 0.663342
NCAPD2 non-SMC condensin I complex, subunit D2 0.663342
SMC3 structural maintenance of chromosomes 3 0.663342
SMC2 structural maintenance of chromosomes 2 0.663342
SMC5 structural maintenance of chromosomes 5 0.663342
SMC6 structural maintenance of chromosomes 6 0.663342
SPC25 SPC25, NDC80 kinetochore complex component 0.663342
SPC24 SPC24, NDC80 kinetochore complex component 0.663342
L3MBTL1 l(3)mbt-like 1 (Drosophila) 0.663342
HJURP Holliday junction recognition protein 0.663342
NDC80 NDC80 kinetochore complex component 0.663342
BLM Bloom syndrome, RecQ helicase-like 0.663342
NUP37 nucleoporin 37kDa 0.663342
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme 0.663342
CHEK1 checkpoint kinase 1 0.663342
CENPA centromere protein A 0.663342
STAG3 stromal antigen 3 0.663342
CHAMP1 chromosome alignment maintaining phosphoprotein 1 0.663342
ZNF207 zinc finger protein 207 0.663342
STRA13 stimulated by retinoic acid 13 0.663342
NTRK1 neurotrophic tyrosine kinase, receptor, type 1 0.663342
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 0.663342
SYCP2 synaptonemal complex protein 2 0.663342
NSMCE1 non-SMC element 1 homolog (S. cerevisiae) 0.663342
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.663342
APITD1 apoptosis-inducing, TAF9-like domain 1 0.663342
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.663342
CENPC centromere protein C 0.663342
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae) 0.663342
CHMP1A charged multivesicular body protein 1A 0.663342
SEH1L SEH1-like (S. cerevisiae) 0.663342
CSNK1A1 casein kinase 1, alpha 1 0.663342
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast) 0.663342
KNTC1 kinetochore associated 1 0.663342
DYNLT3 dynein, light chain, Tctex-type 3 0.663342
NDE1 nudE neurodevelopment protein 1 0.663342
NDNL2 necdin-like 2 0.663342
SPDL1 spindle apparatus coiled-coil protein 1 0.663342
BRD4 bromodomain containing 4 0.663342
WAPAL wings apart-like homolog (Drosophila) 0.663342
NSL1 NSL1, MIS12 kinetochore complex component 0.663342
AHCTF1 AT hook containing transcription factor 1 0.663342
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.663342
CASC5 cancer susceptibility candidate 5 0.663342
DSN1 DSN1, MIS12 kinetochore complex component 0.663342
TP53BP1 tumor protein p53 binding protein 1 0.663342
CTCF CCCTC-binding factor (zinc finger protein) 0.663342
PINX1 PIN2/TERF1 interacting, telomerase inhibitor 1 0.663342
NCAPD3 non-SMC condensin II complex, subunit D3 0.663342
NUP107 nucleoporin 107kDa 0.663342
NIFK nucleolar protein interacting with the FHA domain of MKI67 0.663342
INCENP inner centromere protein antigens 135/155kDa 0.663342
NUP133 nucleoporin 133kDa 0.663342
NDEL1 nudE neurodevelopment protein 1-like 1 0.663342
MAD2L1P1 MAD2 mitotic arrest deficient-like 1 (yeast) pseudogene 1 0.663342
NUF2 NUF2, NDC80 kinetochore complex component 0.663342
SKA1 spindle and kinetochore associated complex subunit 1 0.663342
NCAPH non-SMC condensin I complex, subunit H 0.663342
NCAPG non-SMC condensin I complex, subunit G 0.663342
SKA3 spindle and kinetochore associated complex subunit 3 0.663342
NUP43 nucleoporin 43kDa 0.663342
NUP85 nucleoporin 85kDa 0.663342
ZW10 zw10 kinetochore protein 0.663342
AURKB aurora kinase B 0.663342
AURKC aurora kinase C 0.663342
LIG4 ligase IV, DNA, ATP-dependent 0.663342
SKA2 spindle and kinetochore associated complex subunit 2 0.663342
ZWINT ZW10 interacting kinetochore protein 0.663342
RCC1 regulator of chromosome condensation 1 0.663342
CBX3 chromobox homolog 3 0.237908
P3H4 prolyl 3-hydroxylase family member 4 (non-enzymatic) 0.237908
KIFAP3 kinesin-associated protein 3 0.237908
FKBP6 FK506 binding protein 6, 36kDa 0.237908
RAD51 RAD51 recombinase 0.237908
DMC1 DNA meiotic recombinase 1 0.237908
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila) 0.237908
CCNB1 cyclin B1 0.237908
LRPPRC leucine-rich pentatricopeptide repeat containing 0.237908
UBE2I ubiquitin-conjugating enzyme E2I 0.237908
SYCE3 synaptonemal complex central element protein 3 0.237908
RAD21L1 RAD21-like 1 (S. pombe) 0.237908
RGS12 regulator of G-protein signaling 12 0.237908
RAD21 RAD21 homolog (S. pombe) 0.237908
TUBG1 tubulin, gamma 1 0.237908
TTN titin 0.237908
NOL6 nucleolar protein 6 (RNA-associated) 0.237908
SYCE2 synaptonemal complex central element protein 2 0.098109
MLH3 mutL homolog 3 0.098109
MLH1 mutL homolog 1 0.098109
MSH5 mutS homolog 5 0.098109
SYCE1 synaptonemal complex central element protein 1 0.098109
MSH4 mutS homolog 4 0.098109
NEK2 NIMA-related kinase 2 0.03318
H2AFY H2A histone family, member Y 0.03318
SUV420H1 suppressor of variegation 4-20 homolog 1 (Drosophila) 0.03318
H2AFX H2A histone family, member X 0.03318
HIST1H1T histone cluster 1, H1t 0.03318
CREBBP CREB binding protein 0.03318
LIG3 ligase III, DNA, ATP-dependent 0.03318
SUN2 Sad1 and UNC84 domain containing 2 0.03318
RAD9A RAD9 homolog A (S. pombe) 0.03318
ADD3 adducin 3 (gamma) 0.03318
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1 0.03318
AKAP8 A kinase (PRKA) anchor protein 8 0.03318
PES1 pescadillo ribosomal biogenesis factor 1 0.03318
HSPA2 heat shock 70kDa protein 2 0.03318
HUS1 HUS1 checkpoint homolog (S. pombe) 0.03318
TOP2A topoisomerase (DNA) II alpha 170kDa 0.03318
SUV420H2 suppressor of variegation 4-20 homolog 2 (Drosophila) 0.03318
RAD9B RAD9 homolog B (S. pombe) 0.03318
REC8 REC8 meiotic recombination protein 0.03318
SYCP1 synaptonemal complex protein 1 0.03318
MKI67 marker of proliferation Ki-67 0.03318
CEBPB CCAAT/enhancer binding protein (C/EBP), beta 0.03318
FANCD2 Fanconi anemia, complementation group D2 0.03318
BAZ1B bromodomain adjacent to zinc finger domain, 1B 0.03318
HORMAD1 HORMA domain containing 1 0.03318
RNF212 ring finger protein 212 0.03318
CCNB1IP1 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 0.03318
DNMT3L DNA (cytosine-5-)-methyltransferase 3-like 0.03318
CDX2 caudal type homeobox 2 0.03318
SYCE1L synaptonemal complex central element protein 1-like 0.03318
ORC2 origin recognition complex, subunit 2 0.03318
TOPBP1 topoisomerase (DNA) II binding protein 1 0.03318
CDCA5 cell division cycle associated 5 0.03318
TEX11 testis expressed 11 0.03318
RPA1 replication protein A1, 70kDa 0.03318
CDK2 cyclin-dependent kinase 2 0.03318
TEX12 testis expressed 12 0.03318
HUS1B HUS1 checkpoint homolog b (S. pombe) 0.03318