condensed chromosome, centromeric region Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome. (Gene Ontology, GO_0000779)
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52 proteins co-occuring with the condensed chromosome, centromeric region cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CASC5 cancer susceptibility candidate 5 2.20371
CENPC centromere protein C 1.92995
CENPH centromere protein H 1.69277
MIS12 MIS12 kinetochore complex component 1.41699
SPC24 SPC24, NDC80 kinetochore complex component 1.28729
SPC25 SPC25, NDC80 kinetochore complex component 1.27611
CENPF centromere protein F, 350/400kDa 1.18594
CENPT centromere protein T 1.15057
AURKB aurora kinase B 1.10817
NDC80 NDC80 kinetochore complex component 1.08425
BCAS2 breast carcinoma amplified sequence 2 1.07613
SKA3 spindle and kinetochore associated complex subunit 3 1.07359
DSN1 DSN1, MIS12 kinetochore complex component 1.06498
APITD1 apoptosis-inducing, TAF9-like domain 1 1.03378
SKA1 spindle and kinetochore associated complex subunit 1 1.0248
CENPE centromere protein E, 312kDa 1.00843
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 0.994162
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1 0.95305
NUF2 NUF2, NDC80 kinetochore complex component 0.818075
SKA2 spindle and kinetochore associated complex subunit 2 0.815781
CENPL centromere protein L 0.789649
CENPQ centromere protein Q 0.785071
CENPA centromere protein A 0.768627
CENPN centromere protein N 0.727047
NSL1 NSL1, MIS12 kinetochore complex component 0.72258
CENPW centromere protein W 0.717236
CENPU centromere protein U 0.679413
STRA13 stimulated by retinoic acid 13 0.671593
CSNK1D casein kinase 1, delta 0.668992
CKAP5 cytoskeleton associated protein 5 0.65388
HIPK3 homeodomain interacting protein kinase 3 0.648291
APTX aprataxin 0.632024
PPP1R7 protein phosphatase 1, regulatory subunit 7 0.630745
MAML1 mastermind-like 1 (Drosophila) 0.558871
H3F3C H3 histone, family 3C 0.558457
CENPB centromere protein B, 80kDa 0.519389
LARGE like-glycosyltransferase 0.519389
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.517756
KIF2C kinesin family member 2C 0.437356
DBF4 DBF4 zinc finger 0.351382
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.341529
H3F3A H3 histone, family 3A 0.338128
H3F3B H3 histone, family 3B (H3.3B) 0.338128
BUB3 BUB3 mitotic checkpoint protein 0.299197
PLK1 polo-like kinase 1 0.298084
CDC7 cell division cycle 7 0.273367
DCTN1 dynactin 1 0.268603
LRPAP1 low density lipoprotein receptor-related protein associated protein 1 0.246046
PLK4 polo-like kinase 4 0.227041
INCENP inner centromere protein antigens 135/155kDa 0.218212
ESPL1 extra spindle pole bodies homolog 1 (S. cerevisiae) 0.199993
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.190814