collagen type xviii trimer Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A collagen homotrimer of alpha1(XVIII) chains. (Gene Ontology, GO_0030938)
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Genes

37 proteins co-occuring with the collagen type xviii trimer cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
COL18A1 collagen, type XVIII, alpha 1 1.94461
COL6A5 collagen, type VI, alpha 5 1.40131
PKDCC protein kinase domain containing, cytoplasmic 1.22984
CFC1 cripto, FRL-1, cryptic family 1 1.09391
MATN2 matrilin 2 0.886089
HSPG2 heparan sulfate proteoglycan 2 0.877791
SELL selectin L 0.756799
SULF1 sulfatase 1 0.740064
POSTN periostin, osteoblast specific factor 0.737813
HAPLN1 hyaluronan and proteoglycan link protein 1 0.724365
NID2 nidogen 2 (osteonidogen) 0.682899
IGFBP7 insulin-like growth factor binding protein 7 0.665529
COL11A1 collagen, type XI, alpha 1 0.643144
FBLN1 fibulin 1 0.632878
COL5A1 collagen, type V, alpha 1 0.611201
FBLN2 fibulin 2 0.595593
NID1 nidogen 1 0.562602
LAMB2 laminin, beta 2 (laminin S) 0.512862
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.469203
FBN2 fibrillin 2 0.43538
TYK2 tyrosine kinase 2 0.41221
ITGB7 integrin, beta 7 0.41143
ITGB8 integrin, beta 8 0.410649
ITGB6 integrin, beta 6 0.410259
CDK6 cyclin-dependent kinase 6 0.364331
ITGB4 integrin, beta 4 0.318205
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 0.304771
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.288091
FN1 fibronectin 1 0.240276
MMP7 matrix metallopeptidase 7 0.235607
THBS1 thrombospondin 1 0.235607
SDC2 syndecan 2 0.1921
COL1A1 collagen, type I, alpha 1 0.18859
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 0.179752
IGF2 insulin-like growth factor 2 0.178877
DCN decorin 0.170888
KRT5 keratin 5, type II 0.166405