collagen type viii trimer Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A collagen heterotrimer containing type VIII alpha chains; [alpha1(VIII)2]alpha2(VIII) and alpha1(VIII)[alpha2(VIII)]2 trimers have been observed; type VIII collagen triple helices associate to form regular hexagonal nets. (Gene Ontology, GO_0005591)
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29 proteins co-occuring with the collagen type viii trimer cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
COL8A1 collagen, type VIII, alpha 1 1.94881
LRRC17 leucine rich repeat containing 17 1.86555
COL8A2 collagen, type VIII, alpha 2 1.82186
CHST6 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 1.21118
C1QC complement component 1, q subcomponent, C chain 1.13165
TNFAIP6 tumor necrosis factor, alpha-induced protein 6 0.952096
PLA2G5 phospholipase A2, group V 0.89672
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B 0.840564
COL5A2 collagen, type V, alpha 2 0.814864
CBLN1 cerebellin 1 precursor 0.781869
NID2 nidogen 2 (osteonidogen) 0.778669
KRT12 keratin 12, type I 0.775014
TGFB3 transforming growth factor, beta 3 0.711022
CNTN1 contactin 1 0.701744
TGFB2 transforming growth factor, beta 2 0.651299
KRT3 keratin 3, type II 0.644429
TGFBI transforming growth factor, beta-induced, 68kDa 0.632024
TNC tenascin C 0.455214
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) 0.430647
FGF7 fibroblast growth factor 7 0.396648
IGFBP5 insulin-like growth factor binding protein 5 0.357467
NID1 nidogen 1 0.330589
TJP1 tight junction protein 1 0.321201
FN1 fibronectin 1 0.318579
SMAD7 SMAD family member 7 0.297342
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.295119
CRYAB crystallin, alpha B 0.272633
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.247854
LOX lysyl oxidase 0.246407