collagen type v trimer Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A collagen heterotrimer containing type V alpha chains; [alpha1(V)]2alpha2(V) and alpha1(V)alpha2(V)alpha3(V) trimers have been observed; type V collagen triple helices associate to form fibrils. (Gene Ontology, GO_0005588)
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Genes

67 proteins co-occuring with the collagen type v trimer cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
LRRC17 leucine rich repeat containing 17 1.41923
COL5A1 collagen, type V, alpha 1 1.30658
FN1 fibronectin 1 1.18646
COL5A2 collagen, type V, alpha 2 1.08425
DCN decorin 0.973714
COL5A3 collagen, type V, alpha 3 0.915309
NID2 nidogen 2 (osteonidogen) 0.824041
ASTL astacin-like metallo-endopeptidase (M12 family) 0.801104
TNC tenascin C 0.792854
BGN biglycan 0.731973
LUM lumican 0.712351
BHLHE40 basic helix-loop-helix family, member e40 0.6638
TUBA1B tubulin, alpha 1b 0.644429
COL8A1 collagen, type VIII, alpha 1 0.62393
MATN2 matrilin 2 0.616285
CCNG2 cyclin G2 0.567585
FMOD fibromodulin 0.550186
POSTN periostin, osteoblast specific factor 0.54606
HAPLN1 hyaluronan and proteoglycan link protein 1 0.533719
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B 0.518981
OGN osteoglycin 0.50879
COL14A1 collagen, type XIV, alpha 1 0.491752
ALOX12 arachidonate 12-lipoxygenase 0.470807
MRC2 mannose receptor, C type 2 0.4672
LOX lysyl oxidase 0.460401
COL11A1 collagen, type XI, alpha 1 0.458404
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.45641
MMP1 matrix metallopeptidase 1 0.452029
KERA keratocan 0.424745
SDC3 syndecan 3 0.416902
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.403637
COL18A1 collagen, type XVIII, alpha 1 0.397035
CNTN1 contactin 1 0.396648
HIST2H3A histone cluster 2, H3a 0.395485
HIST2H3C histone cluster 2, H3c 0.395485
HIST2H3D histone cluster 2, H3d 0.395485
FBLN1 fibulin 1 0.387751
FBLN2 fibulin 2 0.383895
PGC progastricsin (pepsinogen C) 0.371599
PRSS1 protease, serine, 1 (trypsin 1) 0.356705
GPC1 glypican 1 0.348346
PLG plasminogen 0.341151
NID1 nidogen 1 0.338506
CHRM2 cholinergic receptor, muscarinic 2 0.337373
COL1A1 collagen, type I, alpha 1 0.314465
KRT4 keratin 4, type II 0.30924
KLKB1 kallikrein B, plasma (Fletcher factor) 1 0.305515
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.302912
ENPEP glutamyl aminopeptidase (aminopeptidase A) 0.295119
CD4 CD4 molecule 0.292157
CD44 CD44 molecule (Indian blood group) 0.287721
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.284032
MMP13 matrix metallopeptidase 13 0.246407
FBN2 fibrillin 2 0.237401
DLK1 delta-like 1 homolog (Drosophila) 0.234533
HAND2 heart and neural crest derivatives expressed 2 0.229532
HLA-C major histocompatibility complex, class I, C 0.228464
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.220673
CXCR3 chemokine (C-X-C motif) receptor 3 0.210549
MMP9 matrix metallopeptidase 9 0.205059
PLAU plasminogen activator, urokinase 0.191777
CD36 CD36 molecule (thrombospondin receptor) 0.18859
IL17A interleukin 17A 0.183328
MMP2 matrix metallopeptidase 2 0.178299
TGFB1 transforming growth factor, beta 1 0.168101
TGM2 transglutaminase 2 0.162763
CD99 CD99 molecule 0.158692