collagen type ix trimer Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils. (Gene Ontology, GO_0005594)
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Genes

34 proteins co-occuring with the collagen type ix trimer cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
COL9A3 collagen, type IX, alpha 3 1.56731
COL9A1 collagen, type IX, alpha 1 1.24131
CEMIP cell migration inducing protein, hyaluronan binding 1.10053
CRYM crystallin, mu 1.07663
JAM2 junctional adhesion molecule 2 1.01139
ACAN aggrecan 0.981959
LECT1 leukocyte cell derived chemotaxin 1 0.876869
COL9A2 collagen, type IX, alpha 2 0.848369
MIA melanoma inhibitory activity 0.843318
CRABP1 cellular retinoic acid binding protein 1 0.791939
HAPLN1 hyaluronan and proteoglycan link protein 1 0.79148
MATN3 matrilin 3 0.695148
FOXJ1 forkhead box J1 0.636295
LAMC2 laminin, gamma 2 0.613742
S100A1 S100 calcium binding protein A1 0.597697
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 0.538238
SOX9 SRY (sex determining region Y)-box 9 0.504724
BMP6 bone morphogenetic protein 6 0.49661
UBB ubiquitin B 0.471208
B3GAT1 beta-1,3-glucuronyltransferase 1 0.460401
ENO1 enolase 1, (alpha) 0.411039
COMP cartilage oligomeric matrix protein 0.395873
CLDN4 claudin 4 0.39471
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8) 0.357847
TGFB3 transforming growth factor, beta 3 0.356324
VCAN versican 0.348346
BGN biglycan 0.322325
BMP7 bone morphogenetic protein 7 0.282926
MAG myelin associated glycoprotein 0.276304
CA2 carbonic anhydrase II 0.199325
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.194698
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor 0.174087
FN1 fibronectin 1 0.163865
COL1A2 collagen, type I, alpha 2 0.159074