Dataset | GO Biological Process Annotations |

Category | structural or functional annotations |

Type | biological process |

Description | The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). (Gene Ontology, GO_0032963) |

External Link | http://amigo.geneontology.org/amigo/term/GO:0032963 |

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84 genes participating in the **collagen metabolic process** biological process from the curated GO Biological Process Annotations dataset.

Symbol | Name |
---|---|

ADAM10 | ADAM metallopeptidase domain 10 |

ADAM15 | ADAM metallopeptidase domain 15 |

ADAM17 | ADAM metallopeptidase domain 17 |

ADAM9 | ADAM metallopeptidase domain 9 |

ADAMTS14 | ADAM metallopeptidase with thrombospondin type 1 motif, 14 |

ADAMTS2 | ADAM metallopeptidase with thrombospondin type 1 motif, 2 |

ADAMTS3 | ADAM metallopeptidase with thrombospondin type 1 motif, 3 |

ARG1 | arginase 1 |

COL10A1 | collagen, type X, alpha 1 |

COL11A1 | collagen, type XI, alpha 1 |

COL11A2 | collagen, type XI, alpha 2 |

COL12A1 | collagen, type XII, alpha 1 |

COL13A1 | collagen, type XIII, alpha 1 |

COL14A1 | collagen, type XIV, alpha 1 |

COL15A1 | collagen, type XV, alpha 1 |

COL16A1 | collagen, type XVI, alpha 1 |

COL17A1 | collagen, type XVII, alpha 1 |

COL18A1 | collagen, type XVIII, alpha 1 |

COL19A1 | collagen, type XIX, alpha 1 |

COL1A1 | collagen, type I, alpha 1 |

COL1A2 | collagen, type I, alpha 2 |

COL23A1 | collagen, type XXIII, alpha 1 |

COL25A1 | collagen, type XXV, alpha 1 |

COL26A1 | collagen, type XXVI, alpha 1 |

COL2A1 | collagen, type II, alpha 1 |

COL3A1 | collagen, type III, alpha 1 |

COL4A1 | collagen, type IV, alpha 1 |

COL4A2 | collagen, type IV, alpha 2 |

COL4A3 | collagen, type IV, alpha 3 (Goodpasture antigen) |

COL4A4 | collagen, type IV, alpha 4 |

COL4A5 | collagen, type IV, alpha 5 |

COL4A6 | collagen, type IV, alpha 6 |

COL5A1 | collagen, type V, alpha 1 |

COL5A2 | collagen, type V, alpha 2 |

COL5A3 | collagen, type V, alpha 3 |

COL6A1 | collagen, type VI, alpha 1 |

COL6A2 | collagen, type VI, alpha 2 |

COL6A3 | collagen, type VI, alpha 3 |

COL6A5 | collagen, type VI, alpha 5 |

COL6A6 | collagen, type VI, alpha 6 |

COL7A1 | collagen, type VII, alpha 1 |

COL8A1 | collagen, type VIII, alpha 1 |

COL8A2 | collagen, type VIII, alpha 2 |

COL9A1 | collagen, type IX, alpha 1 |

COL9A2 | collagen, type IX, alpha 2 |

COL9A3 | collagen, type IX, alpha 3 |

CTSB | cathepsin B |

CTSD | cathepsin D |

CTSK | cathepsin K |

CTSL | cathepsin L |

CTSS | cathepsin S |

ELANE | elastase, neutrophil expressed |

FURIN | furin (paired basic amino acid cleaving enzyme) |

HIF1A | hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) |

ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |

KLK6 | kallikrein-related peptidase 6 |

MMP1 | matrix metallopeptidase 1 |

MMP10 | matrix metallopeptidase 10 |

MMP11 | matrix metallopeptidase 11 |

MMP12 | matrix metallopeptidase 12 |

MMP13 | matrix metallopeptidase 13 |

MMP14 | matrix metallopeptidase 14 (membrane-inserted) |

MMP15 | matrix metallopeptidase 15 (membrane-inserted) |

MMP16 | matrix metallopeptidase 16 (membrane-inserted) |

MMP19 | matrix metallopeptidase 19 |

MMP2 | matrix metallopeptidase 2 |

MMP20 | matrix metallopeptidase 20 |

MMP26 | matrix metallopeptidase 26 |

MMP27 | matrix metallopeptidase 27 |

MMP3 | matrix metallopeptidase 3 |

MMP7 | matrix metallopeptidase 7 |

MMP8 | matrix metallopeptidase 8 |

MMP9 | matrix metallopeptidase 9 |

MRC2 | mannose receptor, C type 2 |

P2RX7 | purinergic receptor P2X, ligand gated ion channel, 7 |

P3H1 | prolyl 3-hydroxylase 1 |

P3H2 | prolyl 3-hydroxylase 2 |

PEPD | peptidase D |

PRSS2 | protease, serine, 2 (trypsin 2) |

PRTN3 | proteinase 3 |

SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |

TNS2 | tensin 2 |

TNXB | tenascin XB |

TRAM2 | translocation associated membrane protein 2 |