cleavage body Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A nuclear body that contains proteins involved in pre-mRNA 3'-end cleavage and polyadenylation, such as DDX1, CSTF2 and CPSFs, as well as the transcription factors TFIIE and TFIIF. Cleavage bodies are localized adjacent to Cajal bodies and are involved in mRNA3'-end processing. (Gene Ontology, GO_0071920)
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Genes

11 proteins co-occuring with the cleavage body cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 2.05103
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa 1.96921
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 1.54404
CPSF3 cleavage and polyadenylation specific factor 3, 73kDa 0.858933
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa 0.850665
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor 0.840105
SLBP stem-loop binding protein 0.786444
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.731973
DAXX death-domain associated protein 0.560114
PML promyelocytic leukemia 0.45641
CBS cystathionine-beta-synthase 0.446465