ciliary rootlet Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm. (Gene Ontology, GO_0035253)
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Genes

21 proteins co-occuring with the ciliary rootlet cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
ANAPC2 anaphase promoting complex subunit 2 1.52428
CROCC ciliary rootlet coiled-coil, rootletin 1.31465
NEK4 NIMA-related kinase 4 1.30175
MYOC myocilin, trabecular meshwork inducible glucocorticoid response 1.03228
RAB28 RAB28, member RAS oncogene family 1.003
SPA17 sperm autoantigenic protein 17 0.96792
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 0.932658
RPGRIP1L RPGRIP1-like 0.90321
CNGB1 cyclic nucleotide gated channel beta 1 0.855717
KTN1 kinectin 1 (kinesin receptor) 0.768627
RPGR retinitis pigmentosa GTPase regulator 0.705714
DNM2 dynamin 2 0.434985
DNAH9 dynein, axonemal, heavy chain 9 0.365095
PSEN1 presenilin 1 0.285507
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 0.247854
APP amyloid beta (A4) precursor protein 0.229888
GLUL glutamate-ammonia ligase 0.219265
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.194045
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.193719
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.193719
ALPP alkaline phosphatase, placental 0.171673