ciliary basal body Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A membrane-tethered, short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum) that is similar in structure to a centriole and derives from it. The cilium basal body is the site of assembly and remodelling of the cilium and serves as a nucleation site for axoneme growth. As well as anchoring the cilium, it is thought to provide a selective gateway regulating the entry of ciliary proteins and vesicles by intraflagellar transport. (Gene Ontology, GO_0036064)
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Genes

77 proteins localized to the ciliary basal body cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TBC1D30 TBC1 domain family, member 30 0.663342
RTTN rotatin 0.663342
CEP41 centrosomal protein 41kDa 0.663342
MKS1 Meckel syndrome, type 1 0.663342
RP2 retinitis pigmentosa 2 (X-linked recessive) 0.663342
RAB28 RAB28, member RAS oncogene family 0.663342
TTLL6 tubulin tyrosine ligase-like family member 6 0.663342
CCSAP centriole, cilia and spindle-associated protein 0.663342
PKD2 polycystic kidney disease 2 (autosomal dominant) 0.663342
FAM161A family with sequence similarity 161, member A 0.663342
RPGR retinitis pigmentosa GTPase regulator 0.663342
CEP19 centrosomal protein 19kDa 0.663342
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive) 0.663342
TBC1D7 TBC1 domain family, member 7 0.663342
KIAA0586 KIAA0586 0.663342
NPHP4 nephronophthisis 4 0.663342
IFT140 intraflagellar transport 140 0.663342
CFAP20 cilia and flagella associated protein 20 0.663342
OFD1 oral-facial-digital syndrome 1 0.663342
CC2D2A coiled-coil and C2 domain containing 2A 0.663342
RPGRIP1L RPGRIP1-like 0.663342
ODF2 outer dense fiber of sperm tails 2 0.663342
PTPN23 protein tyrosine phosphatase, non-receptor type 23 0.663342
PCM1 pericentriolar material 1 0.663342
ALMS1 Alstrom syndrome protein 1 0.663342
AHI1 Abelson helper integration site 1 0.663342
ARL6 ADP-ribosylation factor-like 6 0.663342
B9D2 B9 protein domain 2 0.663342
PARD3 par-3 family cell polarity regulator 0.663342
B9D1 B9 protein domain 1 0.663342
ARL2BP ADP-ribosylation factor-like 2 binding protein 0.663342
TPGS1 tubulin polyglutamylase complex subunit 1 0.663342
POC1B POC1 centriolar protein B 0.663342
TMEM67 transmembrane protein 67 0.663342
POC1A POC1 centriolar protein A 0.663342
DZIP1 DAZ interacting zinc finger protein 1 0.237908
WDR35 WD repeat domain 35 0.237908
EVC Ellis van Creveld protein 0.237908
DZIP1L DAZ interacting zinc finger protein 1-like 0.237908
WDR34 WD repeat domain 34 0.237908
BBS2 Bardet-Biedl syndrome 2 0.237908
FOPNL FGFR1OP N-terminal like 0.237908
RAB3IP RAB3A interacting protein 0.237908
TTC8 tetratricopeptide repeat domain 8 0.237908
BBS4 Bardet-Biedl syndrome 4 0.237908
TTBK2 tau tubulin kinase 2 0.237908
CCDC176 coiled-coil domain containing 176 0.237908
PIFO primary cilia formation 0.237908
IFT88 intraflagellar transport 88 0.237908
IFT57 intraflagellar transport 57 0.237908
RSG1 REM2 and RAB-like small GTPase 1 0.237908
TOPORS topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase 0.237908
IFT172 intraflagellar transport 172 0.098109
BBS5 Bardet-Biedl syndrome 5 0.098109
EZR ezrin 0.03318
IFT20 intraflagellar transport 20 0.03318
SSNA1 Sjogren syndrome nuclear autoantigen 1 0.03318
C2CD3 C2 calcium-dependent domain containing 3 0.03318
TTC26 tetratricopeptide repeat domain 26 0.03318
PCNT pericentrin 0.03318
BBS7 Bardet-Biedl syndrome 7 0.03318
CETN2 centrin, EF-hand protein, 2 0.03318
CETN3 centrin, EF-hand protein, 3 0.03318
RAB8B RAB8B, member RAS oncogene family 0.03318
RAB8A RAB8A, member RAS oncogene family 0.03318
TRAF3IP1 TNF receptor-associated factor 3 interacting protein 1 0.03318
PSEN2 presenilin 2 0.03318
KNCN kinocilin 0.03318
NEDD1 neural precursor cell expressed, developmentally down-regulated 1 0.03318
IFT122 intraflagellar transport 122 0.03318
TUBG1 tubulin, gamma 1 0.03318
CBY1 chibby homolog 1 (Drosophila) 0.03318
IRS1 insulin receptor substrate 1 0.03318
NME7 NME/NM23 family member 7 0.03318
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.03318
AKAP9 A kinase (PRKA) anchor protein 9 0.03318
DISC1 disrupted in schizophrenia 1 0.03318