chromocenter Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure. (Gene Ontology, GO_0010369)
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87 proteins co-occuring with the chromocenter cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TRIM66 tripartite motif containing 66 1.13574
EPC1 enhancer of polycomb homolog 1 (Drosophila) 1.10103
MIS18BP1 MIS18 binding protein 1 1.02331
ASZ1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 0.959748
CBX3 chromobox homolog 3 0.946857
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.944007
H3F3B H3 histone, family 3B (H3.3B) 0.939742
H3F3A H3 histone, family 3A 0.939742
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila) 0.912045
KDM4B lysine (K)-specific demethylase 4B 0.902281
MECP2 methyl CpG binding protein 2 0.869046
BRDT bromodomain, testis-specific 0.858473
CBX5 chromobox homolog 5 0.78004
HIST1H4J histone cluster 1, H4j 0.758161
HIST1H4H histone cluster 1, H4h 0.758161
HIST1H4K histone cluster 1, H4k 0.758161
HIST2H4A histone cluster 2, H4a 0.758161
HIST2H4B histone cluster 2, H4b 0.758161
HIST1H4D histone cluster 1, H4d 0.758161
HIST1H4I histone cluster 1, H4i 0.758161
HIST1H4C histone cluster 1, H4c 0.758161
HIST1H4B histone cluster 1, H4b 0.758161
HIST1H4E histone cluster 1, H4e 0.758161
HIST1H4A histone cluster 1, H4a 0.758161
HIST1H4F histone cluster 1, H4f 0.758161
HIST4H4 histone cluster 4, H4 0.757707
HIST1H4L histone cluster 1, H4l 0.757707
SALL1 spalt-like transcription factor 1 0.747737
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.71768
CSNK2A2 casein kinase 2, alpha prime polypeptide 0.707924
MSL2 male-specific lethal 2 homolog (Drosophila) 0.693832
CTTNBP2 cortactin binding protein 2 0.668126
UHRF1 ubiquitin-like with PHD and ring finger domains 1 0.659913
MAU2 MAU2 sister chromatid cohesion factor 0.656895
SAE1 SUMO1 activating enzyme subunit 1 0.647433
SMC5 structural maintenance of chromosomes 5 0.641001
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.639289
H1FNT H1 histone family, member N, testis-specific 0.608663
ECEL1 endothelin converting enzyme-like 1 0.603596
MED26 mediator complex subunit 26 0.592652
CENPB centromere protein B, 80kDa 0.590133
LRWD1 leucine-rich repeats and WD repeat domain containing 1 0.565923
BIN2 bridging integrator 2 0.552251
MTBP MDM2 binding protein 0.550186
SUV39H2 suppressor of variegation 3-9 homolog 2 (Drosophila) 0.543587
SUV420H2 suppressor of variegation 4-20 homolog 2 (Drosophila) 0.537827
PHF13 PHD finger protein 13 0.536183
HMGB3 high mobility group box 3 0.522659
HIST1H3E histone cluster 1, H3e 0.5149
HIST1H3H histone cluster 1, H3h 0.513677
HIST1H3C histone cluster 1, H3c 0.513677
ZNF222 zinc finger protein 222 0.512862
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) 0.492561
HIST1H3A histone cluster 1, H3a 0.4865
UBA2 ubiquitin-like modifier activating enzyme 2 0.454019
SMC6 structural maintenance of chromosomes 6 0.423174
AURKC aurora kinase C 0.397811
FOXN1 forkhead box N1 0.397811
SOX1 SRY (sex determining region Y)-box 1 0.395485
DOT1L DOT1-like histone H3K79 methyltransferase 0.395098
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.371982
SMC2 structural maintenance of chromosomes 2 0.350622
HDLBP high density lipoprotein binding protein 0.348725
TERF2 telomeric repeat binding factor 2 0.340395
TERF1 telomeric repeat binding factor (NIMA-interacting) 1 0.339261
TBP TATA box binding protein 0.339261
HSF2 heat shock transcription factor 2 0.333225
TRIM24 tripartite motif containing 24 0.333225
UBE2I ubiquitin-conjugating enzyme E2I 0.316708
CNOT1 CCR4-NOT transcription complex, subunit 1 0.313344
CFI complement factor I 0.310732
SETDB1 SET domain, bifurcated 1 0.278877
SRSF2 serine/arginine-rich splicing factor 2 0.276671
UBE2H ubiquitin-conjugating enzyme E2H 0.271167
DEK DEK proto-oncogene 0.262755
EIF3A eukaryotic translation initiation factor 3, subunit A 0.251839
TOP2B topoisomerase (DNA) II beta 180kDa 0.239197
NIPBL Nipped-B homolog (Drosophila) 0.230958
HOXA9 homeobox A9 0.224913
SLBP stem-loop binding protein 0.217511
SUMO1 small ubiquitin-like modifier 1 0.202684
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1 0.19601
ATM ATM serine/threonine kinase 0.195353
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.177154
SYCP3 synaptonemal complex protein 3 0.162546
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 0.142568
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 0.141484