cholesterol, hdl Gene Set

Dataset GAD Gene-Disease Associations
Category disease or phenotype associations
Type disease
Description disease cluster belonging to disease group metabolic (Genetic Association Database)
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Genes

263 genes associated with the disease cholesterol, hdl in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABCA8 ATP-binding cassette, sub-family A (ABC1), member 8
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ACAT2 acetyl-CoA acetyltransferase 2
ADGRL2 adhesion G protein-coupled receptor L2
AFF2 AF4/FMR2 family, member 2
AFF3 AF4/FMR2 family, member 3
ANGPTL4 angiopoietin-like 4
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B
ANO4 anoctamin 4
APOA1 apolipoprotein A-I
APOB apolipoprotein B
APOC1 apolipoprotein C-I
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
AQP9 aquaporin 9
ARL15 ADP-ribosylation factor-like 15
ATF6 activating transcription factor 6
ATP10B ATPase, class V, type 10B
ATP8B4 ATPase, class I, type 8B, member 4
ATRN attractin
AUNIP aurora kinase A and ninein interacting protein
BORA bora, aurora kinase A activator
BTBD1 BTB (POZ) domain containing 1
C15ORF41 chromosome 15 open reading frame 41
C1ORF110 chromosome 1 open reading frame 110
C20ORF196 chromosome 20 open reading frame 196
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit
CALCR calcitonin receptor
CASS4 Cas scaffolding protein family member 4
CCDC102B coiled-coil domain containing 102B
CCDC109B coiled-coil domain containing 109B
CCNY cyclin Y
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like)
CERS6 ceramide synthase 6
CETP cholesteryl ester transfer protein, plasma
CFAP54 cilia and flagella associated 54
CFAP69 cilia and flagella associated protein 69
CHI3L2 chitinase 3-like 2
CLCN3 chloride channel, voltage-sensitive 3
CLEC16A C-type lectin domain family 16, member A
CLEC1B C-type lectin domain family 1, member B
CLNK cytokine-dependent hematopoietic cell linker
CLUL1 clusterin-like 1 (retinal)
CMIP c-Maf inducing protein
CMYA5 cardiomyopathy associated 5
CNTN4 contactin 4
COBLL1 cordon-bleu WH2 repeat protein-like 1
COL27A1 collagen, type XXVII, alpha 1
CRAT carnitine O-acetyltransferase
CSMD1 CUB and Sushi multiple domains 1
CTIF CBP80/20-dependent translation initiation factor
DEFA3 defensin, alpha 3, neutrophil-specific
DIAPH3 diaphanous-related formin 3
DIS3L2 DIS3 like 3'-5' exoribonuclease 2
DLC1 DLC1 Rho GTPase activating protein
DLEU7 deleted in lymphocytic leukemia, 7
DLG2 discs, large homolog 2 (Drosophila)
DMD dystrophin
DNAH11 dynein, axonemal, heavy chain 11
DNAH5 dynein, axonemal, heavy chain 5
DOCK6 dedicator of cytokinesis 6
DPEP2 dipeptidase 2
DPEP3 dipeptidase 3
DPP10 dipeptidyl-peptidase 10 (non-functional)
DPP6 dipeptidyl-peptidase 6
DSCAML1 Down syndrome cell adhesion molecule like 1
DTHD1 death domain containing 1
DUOX1 dual oxidase 1
EDN3 endothelin 3
EIF3H eukaryotic translation initiation factor 3, subunit H
EPB41L2 erythrocyte membrane protein band 4.1-like 2
EPHA3 EPH receptor A3
EPHA6 EPH receptor A6
ERBB4 erb-b2 receptor tyrosine kinase 4
ERC2 ELKS/RAB6-interacting/CAST family member 2
F2 coagulation factor II (thrombin)
FADS1 fatty acid desaturase 1
FADS2 fatty acid desaturase 2
FAH fumarylacetoacetate hydrolase (fumarylacetoacetase)
FAM117B family with sequence similarity 117, member B
FAM184A family with sequence similarity 184, member A
FBN1 fibrillin 1
FBXL17 F-box and leucine-rich repeat protein 17
FLT1 fms-related tyrosine kinase 1
FOXO3 forkhead box O3
FSTL5 follistatin-like 5
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2
GEMIN5 gem (nuclear organelle) associated protein 5
GIT2 G protein-coupled receptor kinase interacting ArfGAP 2
GNA12 guanine nucleotide binding protein (G protein) alpha 12
GPC5 glypican 5
GRID1 glutamate receptor, ionotropic, delta 1
GRID2 glutamate receptor, ionotropic, delta 2
GRIK2 glutamate receptor, ionotropic, kainate 2
GTDC1 glycosyltransferase-like domain containing 1
HCRTR2 hypocretin (orexin) receptor 2
HEATR1 HEAT repeat containing 1
HECTD4 HECT domain containing E3 ubiquitin protein ligase 4
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase
HNF1A HNF1 homeobox A
HNF4A hepatocyte nuclear factor 4, alpha
HNMT histamine N-methyltransferase
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
IL20RA interleukin 20 receptor, alpha
INVS inversin
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains)
ITPK1 inositol-tetrakisphosphate 1-kinase
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1
KCNH7 potassium channel, voltage gated eag related subfamily H, member 7
KCTD10 potassium channel tetramerization domain containing 10
KDSR 3-ketodihydrosphingosine reductase
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2
KIF26B kinesin family member 26B
KLHL1 kelch-like family member 1
KLHL13 kelch-like family member 13
KLHL29 kelch-like family member 29
KLK14 kallikrein-related peptidase 14
KPNA4 karyopherin alpha 4 (importin alpha 3)
KRTAP3-2 keratin associated protein 3-2
KYNU kynureninase
LAMA2 laminin, alpha 2
LCAT lecithin-cholesterol acyltransferase
LINGO2 leucine rich repeat and Ig domain containing 2
LIPC lipase, hepatic
LIPG lipase, endothelial
LPIN2 lipin 2
LPL lipoprotein lipase
LRFN5 leucine rich repeat and fibronectin type III domain containing 5
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
MAML2 mastermind-like 2 (Drosophila)
MAPKAP1 mitogen-activated protein kinase associated protein 1
MCTP2 multiple C2 domains, transmembrane 2
MEGF10 multiple EGF-like-domains 10
MGAT1 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MICU2 mitochondrial calcium uptake 2
MID1 midline 1
MKL2 MKL/myocardin-like 2
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type
MOB3B MOB kinase activator 3B
MTRNR2L6 MT-RNR2-like 6
MTUS1 microtubule associated tumor suppressor 1
MTUS2 microtubule associated tumor suppressor candidate 2
MYO10 myosin X
MYO16 myosin XVI
NCOA7 nuclear receptor coactivator 7
NEGR1 neuronal growth regulator 1
NINL ninein-like
NPAS3 neuronal PAS domain protein 3
NPL N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
NR1H3 nuclear receptor subfamily 1, group H, member 3
NRG3 neuregulin 3
NRXN1 neurexin 1
NUBPL nucleotide binding protein-like
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2
NUTF2 nuclear transport factor 2
NXPH1 neurexophilin 1
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa
OSTM1 osteopetrosis associated transmembrane protein 1
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form)
PALLD palladin, cytoskeletal associated protein
PAQR5 progestin and adipoQ receptor family member V
PARD3B par-3 family cell polarity regulator beta
PARK2 parkin RBR E3 ubiquitin protein ligase
PAWR PRKC, apoptosis, WT1, regulator
PCDH15 protocadherin-related 15
PCIF1 PDX1 C-terminal inhibiting factor 1
PCSK2 proprotein convertase subtilisin/kexin type 2
PCSK7 proprotein convertase subtilisin/kexin type 7
PDE10A phosphodiesterase 10A
PDE1A phosphodiesterase 1A, calmodulin-dependent
PDE4B phosphodiesterase 4B, cAMP-specific
PDE4D phosphodiesterase 4D, cAMP-specific
PEBP4 phosphatidylethanolamine-binding protein 4
PGS1 phosphatidylglycerophosphate synthase 1
PID1 phosphotyrosine interaction domain containing 1
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1
PLS3 plastin 3
PLSCR4 phospholipid scramblase 4
PON1 paraoxonase 1
POTEA POTE ankyrin domain family, member A
POU1F1 POU class 1 homeobox 1
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPP2R2B protein phosphatase 2, regulatory subunit B, beta
PSKH1 protein serine kinase H1
PTPRD protein tyrosine phosphatase, receptor type, D
PTPRM protein tyrosine phosphatase, receptor type, M
PVRL2 poliovirus receptor-related 2 (herpesvirus entry mediator B)
RAB11B RAB11B, member RAS oncogene family
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic)
RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic)
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
RBFOX3 RNA binding protein, fox-1 homolog (C. elegans) 3
RBMS3 RNA binding motif, single stranded interacting protein 3
RFX7 regulatory factor X, 7
RFX8 RFX family member 8, lacking RFX DNA binding domain
RHOF ras homolog family member F (in filopodia)
RNF121 ring finger protein 121
RNF157 ring finger protein 157
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila)
RORA RAR-related orphan receptor A
RTN4 reticulon 4
SAMD4A sterile alpha motif domain containing 4A
SBNO1 strawberry notch homolog 1 (Drosophila)
SCARB1 scavenger receptor class B, member 1
SCFD1 sec1 family domain containing 1
SCN3B sodium channel, voltage gated, type III beta subunit
SEMA6D sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
SGCZ sarcoglycan, zeta
SH3RF1 SH3 domain containing ring finger 1
SHROOM4 shroom family member 4
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
SLC28A3 solute carrier family 28 (concentrative nucleoside transporter), member 3
SLC39A8 solute carrier family 39 (zinc transporter), member 8
SLC7A14 solute carrier family 7, member 14
SLIT2 slit homolog 2 (Drosophila)
SNX25 sorting nexin 25
SORCS1 sortilin-related VPS10 domain containing receptor 1
SPAG17 sperm associated antigen 17
SS18 synovial sarcoma translocation, chromosome 18
SSFA2 sperm specific antigen 2
STARD3 StAR-related lipid transfer (START) domain containing 3
SULT1B1 sulfotransferase family, cytosolic, 1B, member 1
SYT1 synaptotagmin I
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
TBL2 transducin (beta)-like 2
TBR1 T-box, brain, 1
TENM2 teneurin transmembrane protein 2
THSD7B thrombospondin, type I, domain containing 7B
TMEM106B transmembrane protein 106B
TMEM120B transmembrane protein 120B
TMEM163 transmembrane protein 163
TMEM258 transmembrane protein 258
TMOD2 tropomodulin 2 (neuronal)
TMOD3 tropomodulin 3 (ubiquitous)
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast)
TRAPPC8 trafficking protein particle complex 8
TRPM3 transient receptor potential cation channel, subfamily M, member 3
TRPS1 trichorhinophalangeal syndrome I
TTC21B tetratricopeptide repeat domain 21B
TTC39B tetratricopeptide repeat domain 39B
UBE2L3 ubiquitin-conjugating enzyme E2L 3
UNC5D unc-5 homolog D (C. elegans)
USH2A Usher syndrome 2A (autosomal recessive, mild)
USP34 ubiquitin specific peptidase 34
VAPB VAMP (vesicle-associated membrane protein)-associated protein B and C
WDR3 WD repeat domain 3
WDR81 WD repeat domain 81
WWC3 WWC family member 3
WWOX WW domain containing oxidoreductase
XKR9 XK, Kell blood group complex subunit-related family, member 9
ZBTB20 zinc finger and BTB domain containing 20
ZCCHC6 zinc finger, CCHC domain containing 6
ZNF236 zinc finger protein 236
ZNF257 zinc finger protein 257
ZNF492 zinc finger protein 492
ZNF568 zinc finger protein 568
ZNF57 zinc finger protein 57
ZNF664 zinc finger protein 664
ZNF780B zinc finger protein 780B
ZPR1 ZPR1 zinc finger
ZYG11B zyg-11 family member B, cell cycle regulator