cerebellar mossy fiber Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description An axon arising from cerebellar projecting cells in the cochlea, vestibular nuclei, spinal cord, reticular formation, cerebellar nuclei and basilar pontine nuclei. Mossy fibers enter through all three cerebellar peduncles and send collaterals to the deep cerebellar nuclei, then branch in the white matter and terminate in the granule cell layer. Through this branching, a given mossy fiber can innervate several folia. Mossy fibers synapse on granule cells. The synaptic contacts are made at enlargements along the length of the mossy fiber called mossy fiber rosettes. The enlargements of the rosettes give the axons as mossy appearance in Golgi stained preparations. (Gene Ontology, GO_0044300)
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Genes

26 proteins co-occuring with the cerebellar mossy fiber cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CDH7 cadherin 7, type 2 1.02779
CDH19 cadherin 19, type 2 1.00843
GRIN2C glutamate receptor, ionotropic, N-methyl D-aspartate 2C 0.888859
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.761797
SLC17A6 solute carrier family 17 (vesicular glutamate transporter), member 6 0.703067
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7 0.679849
NCAN neurocan 0.656464
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.588037
GAL galanin/GMAP prepropeptide 0.585523
PDGFB platelet-derived growth factor beta polypeptide 0.51694
GRM2 glutamate receptor, metabotropic 2 0.505131
BSN bassoon presynaptic cytomatrix protein 0.487307
LRP5 low density lipoprotein receptor-related protein 5 0.482467
NTF4 neurotrophin 4 0.478038
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.411039
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.390455
GLS glutaminase 0.378507
GLS2 glutaminase 2 (liver, mitochondrial) 0.35899
BCS1L BC1 (ubiquinol-cytochrome c reductase) synthesis-like 0.347587
NTF3 neurotrophin 3 0.310732
DTNB dystrobrevin, beta 0.302168
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) 0.255107
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.241356
CRH corticotropin releasing hormone 0.171673
B3GAT1 beta-1,3-glucuronyltransferase 1 0.169604
CALB2 calbindin 2 0.156342