cell body fiber Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A neuron projection that is found in unipolar neurons and corresponds to the region between the cell body and the point at which the single projection branches. (Gene Ontology, GO_0070852)
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Genes

50 proteins co-occuring with the cell body fiber cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa 0.90321
BDNF brain-derived neurotrophic factor 0.885166
NGF nerve growth factor (beta polypeptide) 0.806606
CYSLTR1 cysteinyl leukotriene receptor 1 0.775928
PSPN persephin 0.771819
SLC22A18 solute carrier family 22, member 18 0.769083
KATNA1 katanin p60 (ATPase containing) subunit A 1 0.757707
ARHGEF25 Rho guanine nucleotide exchange factor (GEF) 25 0.727494
EMG1 EMG1 N1-specific pseudouridine methyltransferase 0.65388
PSIP1 PC4 and SFRS1 interacting protein 1 0.636295
SYBU syntabulin (syntaxin-interacting) 0.633732
NTF4 neurotrophin 4 0.615013
MAP2 microtubule-associated protein 2 0.606128
GALR2 galanin receptor 2 0.600644
ARTN artemin 0.597276
GDNF glial cell derived neurotrophic factor 0.562187
NRG1 neuregulin 1 0.551012
ERBB4 erb-b2 receptor tyrosine kinase 4 0.502288
NRTN neurturin 0.50107
PPY pancreatic polypeptide 0.474018
TH tyrosine hydroxylase 0.463198
SNAP25 synaptosomal-associated protein, 25kDa 0.429859
CAMKK2 calcium/calmodulin-dependent protein kinase kinase 2, beta 0.42396
CALB2 calbindin 2 0.415337
GCGR glucagon receptor 0.41221
GAP43 growth associated protein 43 0.392001
CALB1 calbindin 1, 28kDa 0.391228
SOCS2 suppressor of cytokine signaling 2 0.386208
C1S complement component 1, s subcomponent 0.349105
SPAST spastin 0.339261
LGALS4 lectin, galactoside-binding, soluble, 4 0.331342
NGFR nerve growth factor receptor 0.305515
CIB1 calcium and integrin binding 1 (calmyrin) 0.300682
LIMK1 LIM domain kinase 1 0.300682
IGF1 insulin-like growth factor 1 (somatomedin C) 0.282558
FGF2 fibroblast growth factor 2 (basic) 0.275569
STXBP1 syntaxin binding protein 1 0.258016
SGK1 serum/glucocorticoid regulated kinase 1 0.255107
CAMK2B calcium/calmodulin-dependent protein kinase II beta 0.246046
RTN4 reticulon 4 0.242437
JAG1 jagged 1 0.236683
PARD6A par-6 family cell polarity regulator alpha 0.226331
TAC1 tachykinin, precursor 1 0.225622
GAD1 glutamate decarboxylase 1 (brain, 67kDa) 0.219617
DYNLL1 dynein, light chain, LC8-type 1 0.218212
RELN reelin 0.199993
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.188274
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3 0.187333
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 0.18093
CNTF ciliary neurotrophic factor 0.161275