carboxysome Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description An organelle found in the Cyanobacteria consisting of a proteinaceous coat and enzymes for the fixation of carbon dioxide including mechanisms for the concentration of carbonate to increase the efficiency of fixation under low-carbon dioxide conditions. (Gene Ontology, GO_0031470)
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16 proteins co-occuring with the carboxysome cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
XCL2 chemokine (C motif) ligand 2 1.6684
BCAT1 branched chain amino-acid transaminase 1, cytosolic 1.44403
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 1.33522
MED4 mediator complex subunit 4 1.23609
INF2 inverted formin, FH2 and WH2 domain containing 1.04281
CCDC130 coiled-coil domain containing 130 0.978559
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain 0.952096
CLEC3B C-type lectin domain family 3, member B 0.846991
MGAM maltase-glucoamylase 0.507163
CLEC3A C-type lectin domain family 3, member A 0.449643
CLEC2B C-type lectin domain family 2, member B 0.434985
CLEC10A C-type lectin domain family 10, member A 0.429465
CA2 carbonic anhydrase II 0.340773
GLUL glutamate-ammonia ligase 0.300311
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.294007
DNM2 dynamin 2 0.218563