bronchopulmonary sequestration Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description The presence of microscopic cystic masses of nonfunctioning pulmonary tissue that lack an obvious communication with the tracheobronchial tree. (Human Phenotype Ontology, HP_0010960)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0010960
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Genes

24 genes associated with the bronchopulmonary sequestration phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
DMD dystrophin 1.57973
SPOCK2 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 1.28922
AGBL1 ATP/GTP binding protein-like 1 1.26044
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 1.1737
CTNNA3 catenin (cadherin-associated protein), alpha 3 1.04365
STXBP5 syntaxin binding protein 5 (tomosyn) 1.04365
PAMR1 peptidase domain containing associated with muscle regeneration 1 1.00059
GRHL2 grainyhead-like 2 (Drosophila) 0.969142
KLF12 Kruppel-like factor 12 0.969142
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 0.969142
FHIT fragile histidine triad 0.969142
CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1 0.969142
CEP170 centrosomal protein 170kDa 0.969142
PLXDC2 plexin domain containing 2 0.969142
TNK2 tyrosine kinase, non-receptor, 2 0.919744
LOC100506457 uncharacterized LOC100506457 0.919744
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.903602
MLIP muscular LMNA-interacting protein 0.872695
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.855449
BICC1 BicC family RNA binding protein 1 0.714303
CHST3 carbohydrate (chondroitin 6) sulfotransferase 3 0.620318
RNF130 ring finger protein 130 0.615542
COL23A1 collagen, type XXIII, alpha 1 0.527524
NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 0.514509