bone structure disease Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
Description A bone disease that has_material_basis_in an abnormality in the location or function of the skeletal structure. (Human Disease Ontology, DOID_0080010)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:0080010
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Genes

60 genes associated with the disease bone structure disease in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
ADGRG6 adhesion G protein-coupled receptor G6 1.78856
LBX1 ladybird homeobox 1 1.36166
ZWINT ZW10 interacting kinetochore protein 1.32365
DSCAM Down syndrome cell adhesion molecule 1.16132
UGT3A2 UDP glycosyltransferase 3 family, polypeptide A2 1.14671
PDE10A phosphodiesterase 10A 1.12777
LMBRD2 LMBR1 domain containing 2 1.0675
MYT1 myelin transcription factor 1 1.02071
ALX4 ALX homeobox 4 1.00185
GNA12 guanine nucleotide binding protein (G protein) alpha 12 0.989377
COLEC12 collectin sub-family member 12 0.975639
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 0.958493
LIMCH1 LIM and calponin homology domains 1 0.949336
KRT73 keratin 73, type II 0.814185
TIRAP toll-interleukin 1 receptor (TIR) domain containing adaptor protein 0.783178
GRID1 glutamate receptor, ionotropic, delta 1 0.762941
TFB1M transcription factor B1, mitochondrial 0.762374
DSCAML1 Down syndrome cell adhesion molecule like 1 0.751374
EPHA5 EPH receptor A5 0.743048
CNTNAP2 contactin associated protein-like 2 0.734059
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.730983
RIPK4 receptor-interacting serine-threonine kinase 4 0.722673
PTPRM protein tyrosine phosphatase, receptor type, M 0.722457
CCDC105 coiled-coil domain containing 105 0.718432
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) 0.715762
ZNF704 zinc finger protein 704 0.696378
MCM3AP minichromosome maintenance complex component 3 associated protein 0.66924
EML6 echinoderm microtubule associated protein like 6 0.647016
BACE2 beta-site APP-cleaving enzyme 2 0.642063
CSRP1 cysteine and glycine-rich protein 1 0.637975
TSHZ2 teashirt zinc finger homeobox 2 0.633226
FBN2 fibrillin 2 0.632771
PARK2 parkin RBR E3 ubiquitin protein ligase 0.624472
PRKG1 protein kinase, cGMP-dependent, type I 0.623796
LOC100506274 uncharacterized LOC100506274 0.623051
ATP6V1B1 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 0.613378
BEAN1 brain expressed, associated with NEDD4, 1 0.613378
DKK3 dickkopf WNT signaling pathway inhibitor 3 0.608439
PCNT pericentrin 0.608439
USP47 ubiquitin specific peptidase 47 0.603584
KCNT2 potassium channel, sodium activated subfamily T, member 2 0.60074
AGTR1 angiotensin II receptor, type 1 0.596242
MGAT5B mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B 0.59162
TNIK TRAF2 and NCK interacting kinase 0.59162
LOC100294145 uncharacterized LOC100294145 0.582555
GABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1 0.582155
FAT1 FAT atypical cadherin 1 0.581707
KCTD10 potassium channel tetramerization domain containing 10 0.580999
CSMD1 CUB and Sushi multiple domains 1 0.528352
GPC6 glypican 6 0.499367
PFKP phosphofructokinase, platelet 0.484681
RAB40C RAB40C, member RAS oncogene family 0.478563
STOX1 storkhead box 1 0.478563
PIGQ phosphatidylinositol glycan anchor biosynthesis, class Q 0.478563
MYH14 myosin, heavy chain 14, non-muscle 0.476572
ARL8B ADP-ribosylation factor-like 8B 0.473391
EYS eyes shut homolog (Drosophila) 0.472092
AMPH amphiphysin 0.42506
DIRC3 disrupted in renal carcinoma 3 0.41354
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.406683