bone marrow stromal cell Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

356 proteins co-occuring with the tissue bone marrow stromal cell in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
BMP2 bone morphogenetic protein 2 2.19242
BGLAP bone gamma-carboxyglutamate (gla) protein 2.1919
ALPL alkaline phosphatase, liver/bone/kidney 2.12459
ALPPL2 alkaline phosphatase, placental-like 2 2.12086
ALPP alkaline phosphatase, placental 2.11873
RUNX2 runt-related transcription factor 2 2.06905
SP7 Sp7 transcription factor 1.72981
SPP1 secreted phosphoprotein 1 1.68204
CXCL12 chemokine (C-X-C motif) ligand 12 1.67156
IBSP integrin-binding sialoprotein 1.67156
FGF2 fibroblast growth factor 2 (basic) 1.62307
IL6 interleukin 6 1.62008
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b 1.60068
CD34 CD34 molecule 1.54006
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11 1.36723
IGF1 insulin-like growth factor 1 (somatomedin C) 1.30073
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) 1.2922
VCAM1 vascular cell adhesion molecule 1 1.23762
ACAN aggrecan 1.23361
TGFB1 transforming growth factor, beta 1 1.22113
NES nestin 1.20867
CSF2 colony stimulating factor 2 (granulocyte-macrophage) 1.206
CD44 CD44 molecule (Indian blood group) 1.17802
PTH parathyroid hormone 1.14343
BST2 bone marrow stromal cell antigen 2 1.12394
FN1 fibronectin 1 1.11951
IL7 interleukin 7 1.10801
RBFOX3 RNA binding protein, fox-1 homolog (C. elegans) 3 1.10093
BDNF brain-derived neurotrophic factor 1.0912
BMP4 bone morphogenetic protein 4 1.06956
PPARG peroxisome proliferator-activated receptor gamma 1.05501
CD38 CD38 molecule 1.05281
VEGFA vascular endothelial growth factor A 1.05193
IL11 interleukin 11 1.03566
IL1A interleukin 1, alpha 1.01593
THY1 Thy-1 cell surface antigen 1.01287
BMP7 bone morphogenetic protein 7 1.00719
FLT3 fms-related tyrosine kinase 3 0.981953
DKK1 dickkopf WNT signaling pathway inhibitor 1 0.975015
NGF nerve growth factor (beta polypeptide) 0.974149
THPO thrombopoietin 0.970686
SOX9 SRY (sex determining region Y)-box 9 0.963335
IL3 interleukin 3 0.957722
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.955565
GFAP glial fibrillary acidic protein 0.947378
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.946517
CXCR4 chemokine (C-X-C motif) receptor 4 0.943935
SATB2 SATB homeobox 2 0.9118
MCAM melanoma cell adhesion molecule 0.893921
TNF tumor necrosis factor 0.893496
GDNF glial cell derived neurotrophic factor 0.887981
NOTCH1 notch 1 0.885862
PPP1R1C protein phosphatase 1, regulatory (inhibitor) subunit 1C 0.879935
IL1B interleukin 1, beta 0.871061
BGN biglycan 0.829034
PDXK pyridoxal (pyridoxine, vitamin B6) kinase 0.828197
BMP6 bone morphogenetic protein 6 0.811473
ENO2 enolase 2 (gamma, neuronal) 0.807299
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.801876
ADIG adipogenin 0.796458
SOST sclerostin 0.794792
GJA1 gap junction protein, alpha 1, 43kDa 0.784388
CALCR calcitonin receptor 0.780232
ACPP acid phosphatase, prostate 0.779816
PHEX phosphate regulating endopeptidase homolog, X-linked 0.774834
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.77193
TSPO translocator protein (18kDa) 0.7711
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.763226
NELL1 NEL-like 1 (chicken) 0.759086
CFD complement factor D (adipsin) 0.757845
DLX5 distal-less homeobox 5 0.747515
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.743801
BMP3 bone morphogenetic protein 3 0.74009
ICAM1 intercellular adhesion molecule 1 0.718292
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.713779
NEFL neurofilament, light polypeptide 0.70845
ATF4 activating transcription factor 4 0.708041
KITLG KIT ligand 0.697808
TNMD tenomodulin 0.696989
PTHLH parathyroid hormone-like hormone 0.692493
JUN jun proto-oncogene 0.687592
POSTN periostin, osteoblast specific factor 0.684735
CCND1 cyclin D1 0.681064
LPL lipoprotein lipase 0.674543
MAP2 microtubule-associated protein 2 0.672506
WNT3A wingless-type MMTV integration site family, member 3A 0.670878
CD19 CD19 molecule 0.668843
SLC25A33 solute carrier family 25 (pyrimidine nucleotide carrier), member 33 0.668029
MMP2 matrix metallopeptidase 2 0.659897
DCN decorin 0.655024
UBL7 ubiquitin-like 7 0.633953
BMPR1A bone morphogenetic protein receptor, type IA 0.629506
WISP1 WNT1 inducible signaling pathway protein 1 0.627081
COL1A1 collagen, type I, alpha 1 0.619007
ANXA5 annexin A5 0.6182
MSX2 msh homeobox 2 0.617393
CDC42EP1 CDC42 effector protein (Rho GTPase binding) 1 0.616183
CLEC4D C-type lectin domain family 4, member D 0.610138
EFNB2 ephrin-B2 0.602088
CST9 cystatin 9 (testatin) 0.59646
TMEM135 transmembrane protein 135 0.587629
NOG noggin 0.586026
NGFR nerve growth factor receptor 0.584823
MEPE matrix extracellular phosphoglycoprotein 0.577615
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.577215
RELB v-rel avian reticuloendotheliosis viral oncogene homolog B 0.576816
INA internexin neuronal intermediate filament protein, alpha 0.576015
SHH sonic hedgehog 0.573616
JAG1 jagged 1 0.57082
OSGIN1 oxidative stress induced growth inhibitor 1 0.566828
TP53 tumor protein p53 0.564833
CTSK cathepsin K 0.553683
COL2A1 collagen, type II, alpha 1 0.542963
NANOG Nanog homeobox 0.525955
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.523982
LOXL4 lysyl oxidase-like 4 0.519647
CASC3 cancer susceptibility candidate 3 0.515317
CD40 CD40 molecule, TNF receptor superfamily member 5 0.51453
MMP9 matrix metallopeptidase 9 0.512564
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.508635
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.506279
MYADM myeloid-associated differentiation marker 0.506279
TLE3 transducin-like enhancer of split 3 0.505495
PROM1 prominin 1 0.503533
JUNB jun B proto-oncogene 0.503141
MMP13 matrix metallopeptidase 13 0.501574
PSMB5 proteasome (prosome, macropain) subunit, beta type, 5 0.50079
GLI1 GLI family zinc finger 1 0.499223
BAX BCL2-associated X protein 0.492572
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 0.483986
NLK nemo-like kinase 0.482038
FGF23 fibroblast growth factor 23 0.48087
PARP1 poly (ADP-ribose) polymerase 1 0.478145
FGF1 fibroblast growth factor 1 (acidic) 0.477367
NUBP2 nucleotide binding protein 2 0.473869
SDC1 syndecan 1 0.468824
SYP synaptophysin 0.467273
GPRC6A G protein-coupled receptor, class C, group 6, member A 0.466498
CCL3 chemokine (C-C motif) ligand 3 0.465723
DYNC1I1 dynein, cytoplasmic 1, intermediate chain 1 0.462239
BST1 bone marrow stromal cell antigen 1 0.461465
WWP1 WW domain containing E3 ubiquitin protein ligase 1 0.459918
SLCO5A1 solute carrier organic anion transporter family, member 5A1 0.459145
BIRC5 baculoviral IAP repeat containing 5 0.458759
ENDOG endonuclease G 0.45567
EPO erythropoietin 0.454898
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 0.453355
NEUROD1 neuronal differentiation 1 0.451042
SFRP2 secreted frizzled-related protein 2 0.449501
PDGFB platelet-derived growth factor beta polypeptide 0.443347
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator 0.438739
MYO18A myosin XVIIIA 0.437589
POLQ polymerase (DNA directed), theta 0.435672
TYRO3 TYRO3 protein tyrosine kinase 0.434523
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 0.433757
TGFB2 transforming growth factor, beta 2 0.432608
DLL1 delta-like 1 (Drosophila) 0.42993
GLB1 galactosidase, beta 1 0.428018
SNX9 sorting nexin 9 0.41848
DSPP dentin sialophosphoprotein 0.413151
FGFR3 fibroblast growth factor receptor 3 0.412771
COL16A1 collagen, type XVI, alpha 1 0.411631
HEY1 hes-related family bHLH transcription factor with YRPW motif 1 0.408972
EFS embryonal Fyn-associated substrate 0.408212
NTF3 neurotrophin 3 0.407453
EPHB4 EPH receptor B4 0.405555
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) 0.404797
HMBOX1 homeobox containing 1 0.404039
FABP4 fatty acid binding protein 4, adipocyte 0.399871
BIRC2 baculoviral IAP repeat containing 2 0.398735
SECTM1 secreted and transmembrane 1 0.398357
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A 0.397222
VPS33A vacuolar protein sorting 33 homolog A (S. cerevisiae) 0.397222
AHR aryl hydrocarbon receptor 0.396087
IGFBP6 insulin-like growth factor binding protein 6 0.394197
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.390421
GDF5 growth differentiation factor 5 0.386273
CHRD chordin 0.379875
HBA2 hemoglobin, alpha 2 0.375743
ARNTL aryl hydrocarbon receptor nuclear translocator-like 0.374993
HNRNPLL heterogeneous nuclear ribonucleoprotein L-like 0.371619
SLC9B2 solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 0.370496
PREB prolactin regulatory element binding 0.364513
MAPK3 mitogen-activated protein kinase 3 0.36302
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b 0.358919
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.357802
CD164 CD164 molecule, sialomucin 0.353712
TAGLN transgelin 0.351856
HBA1 hemoglobin, alpha 1 0.350001
TH tyrosine hydroxylase 0.34926
LIMD1 LIM domains containing 1 0.348519
S1PR4 sphingosine-1-phosphate receptor 4 0.347778
IL4 interleukin 4 0.347038
PTGER4 prostaglandin E receptor 4 (subtype EP4) 0.346668
BCL2L1 BCL2-like 1 0.346298
GATA2 GATA binding protein 2 0.342602
GADD45GIP1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 0.340388
CDV3 CDV3 homolog (mouse) 0.338914
CD33 CD33 molecule 0.333028
BCL2 B-cell CLL/lymphoma 2 0.332294
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.331927
TGFB3 transforming growth factor, beta 3 0.33156
LRP5 low density lipoprotein receptor-related protein 5 0.32753
IGFBP5 insulin-like growth factor binding protein 5 0.32753
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.325335
CD40LG CD40 ligand 0.325335
BMP1 bone morphogenetic protein 1 0.324605
CTGF connective tissue growth factor 0.324239
IPO8 importin 8 0.322779
ANGPT1 angiopoietin 1 0.321685
GLI2 GLI family zinc finger 2 0.32132
IGFBP3 insulin-like growth factor binding protein 3 0.320956
AXL AXL receptor tyrosine kinase 0.317679
AR androgen receptor 0.316588
MRAP melanocortin 2 receptor accessory protein 0.312957
TERT telomerase reverse transcriptase 0.311145
IL7R interleukin 7 receptor 0.310059
PJA1 praja ring finger 1, E3 ubiquitin protein ligase 0.309697
MIR211 microRNA 211 0.309697
KCTD12 potassium channel tetramerization domain containing 12 0.308974
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.308612
CNTF ciliary neurotrophic factor 0.308251
RTN4 reticulon 4 0.307889
FANCM Fanconi anemia, complementation group M 0.307528
ALCAM activated leukocyte cell adhesion molecule 0.305361
TGFBR1 transforming growth factor, beta receptor 1 0.30464
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.30464
DKK2 dickkopf WNT signaling pathway inhibitor 2 0.302478
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 0.301758
NCAN neurocan 0.301398
ABCD4 ATP-binding cassette, sub-family D (ALD), member 4 0.301039
TRO trophinin 0.299242
CCND2 cyclin D2 0.298165
IL6R interleukin 6 receptor 0.297806
LGALS1 lectin, galactoside-binding, soluble, 1 0.296372
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor 0.292793
SMAD9 SMAD family member 9 0.292436
CXCL8 chemokine (C-X-C motif) ligand 8 0.291365
HDAC9 histone deacetylase 9 0.291008
EPHB2 EPH receptor B2 0.287803
COL15A1 collagen, type XV, alpha 1 0.285316
LRP6 low density lipoprotein receptor-related protein 6 0.283545
CHRND cholinergic receptor, nicotinic, delta (muscle) 0.283545
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.283545
JPH4 junctophilin 4 0.282483
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.273696
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase 0.272649
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.271952
PCOLCE procollagen C-endopeptidase enhancer 0.271952
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.269521
INS insulin 0.269521
MN1 meningioma (disrupted in balanced translocation) 1 0.267791
ETV5 ets variant 5 0.262304
PTCH1 patched 1 0.260606
NFE2L1 nuclear factor, erythroid 2-like 1 0.258243
IFNA1 interferon, alpha 1 0.258243
PLOD3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 0.258243
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.257237
IGFALS insulin-like growth factor binding protein, acid labile subunit 0.257237
GAP43 growth associated protein 43 0.256234
NCAM1 neural cell adhesion molecule 1 0.256234
PKD1P6 polycystic kidney disease 1 (autosomal dominant) pseudogene 6 0.255567
IGFBP2 insulin-like growth factor binding protein 2, 36kDa 0.254902
DNTT DNA nucleotidylexotransferase 0.253908
MAPK8 mitogen-activated protein kinase 8 0.253248
PCNA proliferating cell nuclear antigen 0.252261
FGFR1 fibroblast growth factor receptor 1 0.24676
IHH indian hedgehog 0.24486
ILK integrin-linked kinase 0.243918
FGFR2 fibroblast growth factor receptor 2 0.240216
SFRP1 secreted frizzled-related protein 1 0.23961
NEUROG2 neurogenin 2 0.239007
WNT3 wingless-type MMTV integration site family, member 3 0.238406
PIM2 Pim-2 proto-oncogene, serine/threonine kinase 0.238108
NBPF8 neuroblastoma breakpoint family, member 8 0.23781
CCND3 cyclin D3 0.237513
FER fer (fps/fes related) tyrosine kinase 0.237216
PRR4 proline rich 4 (lacrimal) 0.236627
FOS FBJ murine osteosarcoma viral oncogene homolog 0.236627
NRTN neurturin 0.236332
JAK2 Janus kinase 2 0.232599
OGN osteoglycin 0.230931
DMP1 dentin matrix acidic phosphoprotein 1 0.230382
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.229032
LIM2 lens intrinsic membrane protein 2, 19kDa 0.229032
ESR1 estrogen receptor 1 0.228764
MMP12 matrix metallopeptidase 12 0.227445
UBQLN2 ubiquilin 2 0.227445
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.227186
FANCI Fanconi anemia, complementation group I 0.2259
CCL2 chemokine (C-C motif) ligand 2 0.224398
FGF7 fibroblast growth factor 7 0.218613
FHL2 four and a half LIM domains 2 0.218398
DIABLO diablo, IAP-binding mitochondrial protein 0.218186
SIK1 salt-inducible kinase 1 0.217554
BCL9 B-cell CLL/lymphoma 9 0.216325
KDR kinase insert domain receptor 0.214954
JAG2 jagged 2 0.214576
CD4 CD4 molecule 0.21365
CD5 CD5 molecule 0.213471
LTB lymphotoxin beta (TNF superfamily, member 3) 0.213471
KLF1 Kruppel-like factor 1 (erythroid) 0.206055
RBMS1 RNA binding motif, single stranded interacting protein 1 0.202358
SYS1 Sys1 golgi trafficking protein 0.199481
SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 0.193441
ZHX1 zinc fingers and homeoboxes 1 0.193086
MPL MPL proto-oncogene, thrombopoietin receptor 0.191177
SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 0.190482
SMAD2 SMAD family member 2 0.190458
CSF1R colony stimulating factor 1 receptor 0.190412
EGR1 early growth response 1 0.189853
EPOR erythropoietin receptor 0.189385
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.189264
PPIC peptidylprolyl isomerase C (cyclophilin C) 0.18909
HOXB4 homeobox B4 0.187179
FASLG Fas ligand (TNF superfamily, member 6) 0.185147
TSPAN16 tetraspanin 16 0.184984
MDM4 MDM4, p53 regulator 0.183961
SRPR signal recognition particle receptor (docking protein) 0.182511
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.1818
RAG2 recombination activating gene 2 0.181784
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.18167
MYH1 myosin, heavy chain 1, skeletal muscle, adult 0.181066
KLRC3 killer cell lectin-like receptor subfamily C, member 3 0.1807
ICT1 immature colon carcinoma transcript 1 0.180664
OSM oncostatin M 0.180396
SMAD3 SMAD family member 3 0.180341
NOV nephroblastoma overexpressed 0.179633
PTPRC protein tyrosine phosphatase, receptor type, C 0.178373
CYS1 cystin 1 0.177773
TP73 tumor protein p73 0.177285
TICAM2 toll-like receptor adaptor molecule 2 0.177102
PAX5 paired box 5 0.176802
RBSN rabenosyn, RAB effector 0.176449
GRHL1 grainyhead-like 1 (Drosophila) 0.175838
FANCD2 Fanconi anemia, complementation group D2 0.175332
CNN1 calponin 1, basic, smooth muscle 0.174048
HOXB7 homeobox B7 0.173626
NPPA natriuretic peptide A 0.173163
IGFBP4 insulin-like growth factor binding protein 4 0.172412
ACVRL1 activin A receptor type II-like 1 0.168985
EN2 engrailed homeobox 2 0.168801
KIR3DL1 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1 0.168425
PRG4 proteoglycan 4 0.167616
WNT10B wingless-type MMTV integration site family, member 10B 0.167381
PGM1 phosphoglucomutase 1 0.166654
ADCY6 adenylate cyclase 6 0.165558
CRX cone-rod homeobox 0.16468
PAX2 paired box 2 0.164183
TIMP1 TIMP metallopeptidase inhibitor 1 0.163769
PTH1R parathyroid hormone 1 receptor 0.162484
PRKD1 protein kinase D1 0.160459
CES1 carboxylesterase 1 0.157998
VLDLR very low density lipoprotein receptor 0.156955
EBF1 early B-cell factor 1 0.156659
ENPEP glutamyl aminopeptidase (aminopeptidase A) 0.156062