basal plasma membrane Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis. (Gene Ontology, GO_0009925)
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Genes

96 proteins co-occuring with the basal plasma membrane cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
GNL1 guanine nucleotide binding protein-like 1 0.940689
DNAH8 dynein, axonemal, heavy chain 8 0.725258
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) 0.71857
CCDC34 coiled-coil domain containing 34 0.65001
ALPPL2 alkaline phosphatase, placental-like 2 0.642286
MST1R macrophage stimulating 1 receptor 0.641429
ALPP alkaline phosphatase, placental 0.641429
ALPL alkaline phosphatase, liver/bone/kidney 0.641429
AQP7 aquaporin 7 0.626909
SLC27A5 solute carrier family 27 (fatty acid transporter), member 5 0.58678
PTH parathyroid hormone 0.572994
FN1 fibronectin 1 0.570496
COL7A1 collagen, type VII, alpha 1 0.560114
VCL vinculin 0.550599
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.53906
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.537005
INS insulin 0.500664
SLC38A1 solute carrier family 38, member 1 0.492966
PTHLH parathyroid hormone-like hormone 0.492561
FLOT2 flotillin 2 0.4865
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4 0.472813
DST dystonin 0.470807
CDCP1 CUB domain containing protein 1 0.470005
KCNA5 potassium channel, voltage gated shaker related subfamily A, member 5 0.438937
P2RX2 purinergic receptor P2X, ligand gated ion channel, 2 0.413382
TBC1D4 TBC1 domain family, member 4 0.41143
CLDN6 claudin 6 0.410649
KCNG1 potassium channel, voltage gated modifier subfamily G, member 1 0.398587
RAB7A RAB7A, member RAS oncogene family 0.384665
SLC25A18 solute carrier family 25 (glutamate carrier), member 18 0.376202
RARA retinoic acid receptor, alpha 0.371599
USP1 ubiquitin specific peptidase 1 0.355944
FTL ferritin, light polypeptide 0.350622
FTH1 ferritin, heavy polypeptide 1 0.348725
ATP2B3 ATPase, Ca++ transporting, plasma membrane 3 0.347967
AQP5 aquaporin 5 0.343421
CD44 CD44 molecule (Indian blood group) 0.342285
CDKN2A cyclin-dependent kinase inhibitor 2A 0.338884
ATP11A ATPase, class VI, type 11A 0.333602
P2RY6 pyrimidinergic receptor P2Y, G-protein coupled, 6 0.323075
COL14A1 collagen, type XIV, alpha 1 0.317082
SETD7 SET domain containing (lysine methyltransferase) 7 0.315212
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.313344
APC adenomatous polyposis coli 0.307749
FERMT2 fermitin family member 2 0.299197
CALCA calcitonin-related polypeptide alpha 0.298084
BCAM basal cell adhesion molecule (Lutheran blood group) 0.297713
GRIK4 glutamate receptor, ionotropic, kainate 4 0.296601
SPTBN4 spectrin, beta, non-erythrocytic 4 0.291417
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2 0.291417
SLC38A2 solute carrier family 38, member 2 0.285507
ITGA6 integrin, alpha 6 0.27998
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.268237
P2RX1 purinergic receptor P2X, ligand gated ion channel, 1 0.266774
CAV1 caveolin 1, caveolae protein, 22kDa 0.251114
GUCY2C guanylate cyclase 2C 0.250389
UPK3A uroplakin 3A 0.24894
C3 complement component 3 0.247492
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group) 0.244601
NPR1 natriuretic peptide receptor 1 0.242797
COL17A1 collagen, type XVII, alpha 1 0.239557
FOLR1 folate receptor 1 (adult) 0.239197
CHRM2 cholinergic receptor, muscarinic 2 0.229532
CLEC3B C-type lectin domain family 3, member B 0.228464
SERPINA2 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2 (gene/pseudogene) 0.21716
CD79A CD79a molecule, immunoglobulin-associated alpha 0.21716
NT5E 5'-nucleotidase, ecto (CD73) 0.21681
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1 0.21681
RNGTT RNA guanylyltransferase and 5'-phosphatase 0.213322
AVPR2 arginine vasopressin receptor 2 0.213322
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.211587
CAV3 caveolin 3 0.209513
TRPV6 transient receptor potential cation channel, subfamily V, member 6 0.206766
SPTBN1 spectrin, beta, non-erythrocytic 1 0.206082
KLK1 kallikrein 1 0.200328
TRPV5 transient receptor potential cation channel, subfamily V, member 5 0.198991
AQP8 aquaporin 8 0.197993
AQP4 aquaporin 4 0.196339
AANAT aralkylamine N-acetyltransferase 0.19601
SERPINB8 serpin peptidase inhibitor, clade B (ovalbumin), member 8 0.188274
ICAM2 intercellular adhesion molecule 2 0.186708
DMRTA1 DMRT-like family A1 0.18516
KRT13 keratin 13, type I 0.184547
SLC16A4 solute carrier family 16, member 4 0.181823
AQP2 aquaporin 2 (collecting duct) 0.180045
CDC16 cell division cycle 16 0.172468
MGAM maltase-glucoamylase 0.171937
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 0.166167
JUP junction plakoglobin 0.165932
CFLAR CASP8 and FADD-like apoptosis regulator 0.164315
CALCR calcitonin receptor 0.163641
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 0.16342
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 0.161905
PXN paxillin 0.159658
SEBOX SEBOX homeobox 0.157578
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 0.156688