baf-type complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A SWI/SNF-type complex that contains a subunit from the BAF (Brahma-Associated Factor) family. (Gene Ontology, GO_0090544)
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Genes

172 proteins co-occuring with the baf-type complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
PBRM1 polybromo 1 2.12822
BANF1 barrier to autointegration factor 1 2.09109
ACTL6A actin-like 6A 1.75981
BRD7 bromodomain containing 7 1.66055
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 1.59199
PHF10 PHD finger protein 10 1.55934
ARID1B AT rich interactive domain 1B (SWI1-like) 1.47853
ARID1A AT rich interactive domain 1A (SWI-like) 1.46269
ACTL6B actin-like 6B 1.45534
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 1.37962
DPF1 D4, zinc and double PHD fingers family 1 1.33304
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1 1.26075
THBS4 thrombospondin 4 1.23766
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 1.22672
BCL7C B-cell CLL/lymphoma 7C 1.15262
DPF3 D4, zinc and double PHD fingers, family 3 1.08831
BRD9 bromodomain containing 9 1.06448
BCL7A B-cell CLL/lymphoma 7A 1.05539
CHD7 chromodomain helicase DNA binding protein 7 0.923728
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 0.876869
SS18 synovial sarcoma translocation, chromosome 18 0.84791
PHF8 PHD finger protein 8 0.797436
DPF2 D4, zinc and double PHD fingers family 2 0.743671
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.736913
S100A13 S100 calcium binding protein A13 0.595593
MAML1 mastermind-like 1 (Drosophila) 0.564262
VRK1 vaccinia related kinase 1 0.558042
SSX1 synovial sarcoma, X breakpoint 1 0.557629
BRD3 bromodomain containing 3 0.529618
CRABP1 cellular retinoic acid binding protein 1 0.523067
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 0.514085
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.49742
SIK1 salt-inducible kinase 1 0.411039
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 0.40247
TFF1 trefoil factor 1 0.395098
RBP2 retinol binding protein 2, cellular 0.387365
REST RE1-silencing transcription factor 0.336619
CRABP2 cellular retinoic acid binding protein 2 0.333979
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.317456
HAND2 heart and neural crest derivatives expressed 2 0.305143
TWIST1 twist family bHLH transcription factor 1 0.302168
ASPH aspartate beta-hydroxylase 0.298084
RAD18 RAD18 E3 ubiquitin protein ligase 0.295119
KDM1A lysine (K)-specific demethylase 1A 0.248216
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 0.235249
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.229176
H3F3B H3 histone, family 3B (H3.3B) 0.225976
H3F3A H3 histone, family 3A 0.225976
BRCA1 breast cancer 1, early onset 0.214366
HIST2H2AC histone cluster 2, H2ac 0.172735
HIST2H2AA4 histone cluster 2, H2aa4 0.172468
HIST2H2AA3 histone cluster 2, H2aa3 0.172468
BMI1 BMI1 proto-oncogene, polycomb ring finger 0.158692
TRIM9 tripartite motif containing 9 0.143215
HDAC1 histone deacetylase 1 0.139677
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 0.13645
CCND3 cyclin D3 0.135721
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 0.13473
DNAH8 dynein, axonemal, heavy chain 8 0.134246
ERCC6L excision repair cross-complementation group 6-like 0.134028
ADNP activity-dependent neuroprotector homeobox 0.133851
NOTUM notum pectinacetylesterase homolog (Drosophila) 0.133289
TSHZ3 teashirt zinc finger homeobox 3 0.131938
ZZZ3 zinc finger, ZZ-type containing 3 0.131843
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.131201
RASA2 RAS p21 protein activator 2 0.130874
AKIRIN2 akirin 2 0.130865
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.130429
PHF6 PHD finger protein 6 0.130329
RUVBL2 RuvB-like AAA ATPase 2 0.130311
HIST2H4B histone cluster 2, H4b 0.129976
HIST2H4A histone cluster 2, H4a 0.129976
HIST1H4B histone cluster 1, H4b 0.129976
HIST1H4E histone cluster 1, H4e 0.129976
HIST1H4A histone cluster 1, H4a 0.129976
HIST1H4J histone cluster 1, H4j 0.129976
HIST1H4D histone cluster 1, H4d 0.129976
HIST1H4C histone cluster 1, H4c 0.129976
HIST1H4K histone cluster 1, H4k 0.129976
HIST1H4H histone cluster 1, H4h 0.129976
HIST1H4I histone cluster 1, H4i 0.129976
HIST1H4F histone cluster 1, H4f 0.129976
HIST1H4L histone cluster 1, H4l 0.129966
HIST4H4 histone cluster 4, H4 0.129966
EPHA6 EPH receptor A6 0.129082
CSRP2BP CSRP2 binding protein 0.129031
ISYNA1 inositol-3-phosphate synthase 1 0.128793
TBC1D24 TBC1 domain family, member 24 0.128751
CDX4 caudal type homeobox 4 0.12856
CDK2 cyclin-dependent kinase 2 0.128495
SGK2 serum/glucocorticoid regulated kinase 2 0.128256
PIH1D1 PIH1 domain containing 1 0.127355
METTL3 methyltransferase like 3 0.12634
PRMT7 protein arginine methyltransferase 7 0.125414
CREBBP CREB binding protein 0.125373
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 0.125203
MED7 mediator complex subunit 7 0.125075
ZMIZ1 zinc finger, MIZ-type containing 1 0.124442
GTF2I general transcription factor IIi 0.124381
GMNN geminin, DNA replication inhibitor 0.12429
NEUROD2 neuronal differentiation 2 0.124198
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 0.124198
KAT2A K(lysine) acetyltransferase 2A 0.124152
MCPH1 microcephalin 1 0.123918
TP53 tumor protein p53 0.123354
GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like 0.122747
CDK6 cyclin-dependent kinase 6 0.122625
HIST1H2BH histone cluster 1, H2bh 0.122092
HIST3H2BB histone cluster 3, H2bb 0.122092
HIST2H2BF histone cluster 2, H2bf 0.122092
HIST1H2BD histone cluster 1, H2bd 0.122074
HIST1H2BC histone cluster 1, H2bc 0.12202
HIST1H2BF histone cluster 1, H2bf 0.12202
HIST1H2BA histone cluster 1, H2ba 0.121965
CARM1 coactivator-associated arginine methyltransferase 1 0.121836
KLF1 Kruppel-like factor 1 (erythroid) 0.121556
BAP1 BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) 0.120661
HDAC3 histone deacetylase 3 0.120396
RRAD Ras-related associated with diabetes 0.119853
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.119552
ARID3A AT rich interactive domain 3A (BRIGHT-like) 0.119552
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1 0.119246
PNPLA3 patatin-like phospholipase domain containing 3 0.119201
AADAT aminoadipate aminotransferase 0.119067
TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa 0.119022
EHF ets homologous factor 0.118356
HDAC9 histone deacetylase 9 0.118072
YY1 YY1 transcription factor 0.117611
TBP TATA box binding protein 0.117562
TADA2A transcriptional adaptor 2A 0.117537
RB1 retinoblastoma 1 0.117463
PRMT1 protein arginine methyltransferase 1 0.117414
CD44 CD44 molecule (Indian blood group) 0.115987
PRMT3 protein arginine methyltransferase 3 0.115715
TRIM27 tripartite motif containing 27 0.115633
HIPK3 homeodomain interacting protein kinase 3 0.11541
KAT2B K(lysine) acetyltransferase 2B 0.115242
SOX11 SRY (sex determining region Y)-box 11 0.114757
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.114757
CEBPB CCAAT/enhancer binding protein (C/EBP), beta 0.114524
SGK3 serum/glucocorticoid regulated kinase family, member 3 0.114436
GHRL ghrelin/obestatin prepropeptide 0.114171
NFIB nuclear factor I/B 0.114141
TADA3 transcriptional adaptor 3 0.11405
KDM5A lysine (K)-specific demethylase 5A 0.113869
PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5 0.113688
BCOR BCL6 corepressor 0.113472
HLTF helicase-like transcription factor 0.113441
AR androgen receptor 0.113256
YEATS4 YEATS domain containing 4 0.113131
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.112972
E2F6 E2F transcription factor 6 0.11294
XPC xeroderma pigmentosum, complementation group C 0.111802
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.111702
KAT5 K(lysine) acetyltransferase 5 0.111702
FOXM1 forkhead box M1 0.11133
SFPQ splicing factor proline/glutamine-rich 0.111296
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.111023
VMP1 vacuole membrane protein 1 0.111023
FLII flightless I homolog (Drosophila) 0.110603
MYOD1 myogenic differentiation 1 0.110392
MTSS1 metastasis suppressor 1 0.109889
MITF microphthalmia-associated transcription factor 0.108927
POU2F1 POU class 2 homeobox 1 0.108472
RELB v-rel avian reticuloendotheliosis viral oncogene homolog B 0.108433
HDAC2 histone deacetylase 2 0.108395
JARID2 jumonji, AT rich interactive domain 2 0.107575
PRC1 protein regulator of cytokinesis 1 0.107496
CDX1 caudal type homeobox 1 0.106852
MYEF2 myelin expression factor 2 0.106525
LGALS4 lectin, galactoside-binding, soluble, 4 0.105521
CHD3 chromodomain helicase DNA binding protein 3 0.105478