atypical teratoid rhabdoid tumor Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description A brain cancer that is usually located in the brain, but can occur anywhere in the central nervous system. (Human Disease Ontology, DOID_2129)
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Genes

91 genes co-occuring with the disease atypical teratoid rhabdoid tumor in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 2.5839
CLDN6 claudin 6 1.33458
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 1.18755
SYP synaptophysin 1.16778
GFAP glial fibrillary acidic protein 1.02524
SERPINI1 serpin peptidase inhibitor, clade I (neuroserpin), member 1 0.929173
PID1 phosphotyrosine interaction domain containing 1 0.865912
UTF1 undifferentiated embryonic cell transcription factor 1 0.827819
WWC1 WW and C2 domain containing 1 0.80977
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.770027
COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 0.758601
TCF21 transcription factor 21 0.70434
SCGN secretagogin, EF-hand calcium binding protein 0.703134
KIAA1549 KIAA1549 0.691896
NANOG Nanog homeobox 0.646953
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.635528
RAD17 RAD17 homolog (S. pombe) 0.627672
NF2 neurofibromin 2 (merlin) 0.626103
AURKA aurora kinase A 0.612792
SOX2 SRY (sex determining region Y)-box 2 0.60342
FABP7 fatty acid binding protein 7, brain 0.598351
PBRM1 polybromo 1 0.573828
MIR25 microRNA 25 0.560227
SPP1 secreted phosphoprotein 1 0.549359
BCR breakpoint cluster region 0.536183
CD99 CD99 molecule 0.518805
MIRLET7B microRNA let-7b 0.508808
ATG12 autophagy related 12 0.501527
SUFU suppressor of fused homolog (Drosophila) 0.497703
ENO2 enolase 2 (gamma, neuronal) 0.487407
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.465416
HGFAC HGF activator 0.462016
IGF1R insulin-like growth factor 1 receptor 0.449571
BMP2K BMP2 inducible kinase 0.443171
TP53 tumor protein p53 0.435651
ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein 0.434524
MYOG myogenin (myogenic factor 4) 0.433397
PCCA propionyl CoA carboxylase, alpha polypeptide 0.411657
PROM1 prominin 1 0.411657
HDAC1 histone deacetylase 1 0.404184
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein 0.404184
MERTK MER proto-oncogene, tyrosine kinase 0.394491
CCND1 cyclin D1 0.394118
BRD4 bromodomain containing 4 0.394118
OTX2 orthodenticle homeobox 2 0.384822
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.384079
POU5F1 POU class 5 homeobox 1 0.371477
SALL4 spalt-like transcription factor 4 0.35892
EWSR1 EWS RNA-binding protein 1 0.357446
POLI polymerase (DNA directed) iota 0.344574
ARID1A AT rich interactive domain 1A (SWI-like) 0.340173
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble 0.335778
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.331391
INA internexin neuronal intermediate filament protein, alpha 0.298731
MIR221 microRNA 221 0.298371
TPT1 tumor protein, translationally-controlled 1 0.28831
ATG7 autophagy related 7 0.287593
HDAC3 histone deacetylase 3 0.270108
FCGR1A Fc fragment of IgG, high affinity Ia, receptor (CD64) 0.242245
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.241196
GLI2 GLI family zinc finger 2 0.23492
ALPPL2 alkaline phosphatase, placental-like 2 0.229024
ALPP alkaline phosphatase, placental 0.228679
ALPL alkaline phosphatase, liver/bone/kidney 0.227988
SOX10 SRY (sex determining region Y)-box 10 0.224884
HIST1H4J histone cluster 1, H4j 0.221793
HIST1H4I histone cluster 1, H4i 0.221793
HIST1H4H histone cluster 1, H4h 0.221793
HIST1H4F histone cluster 1, H4f 0.221793
HIST1H4E histone cluster 1, H4e 0.221793
HIST1H4A histone cluster 1, H4a 0.221793
HIST1H4B histone cluster 1, H4b 0.221793
HIST2H4B histone cluster 2, H4b 0.221793
HIST1H4C histone cluster 1, H4c 0.221793
HIST1H4D histone cluster 1, H4d 0.221793
HIST1H4K histone cluster 1, H4k 0.221793
HIST2H4A histone cluster 2, H4a 0.221108
HIST4H4 histone cluster 4, H4 0.219398
HIST1H4L histone cluster 1, H4l 0.219398
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.214975
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.205916
DES desmin 0.194548
DICER1 dicer 1, ribonuclease type III 0.191719
RHD Rh blood group, D antigen 0.18621
SMO smoothened, frizzled class receptor 0.182666
DPYSL3 dihydropyrimidinase-like 3 0.172038
HDAC9 histone deacetylase 9 0.171036
KLF4 Kruppel-like factor 4 (gut) 0.169571
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 0.168854
CLDN1 claudin 1 0.163111
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.162707