apicoplast Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The plastid organelle found in apicomplexans. (Gene Ontology, GO_0020011)
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Genes

91 proteins co-occuring with the apicoplast cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
FDXR ferredoxin reductase 1.64314
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa 1.5497
LIPT1 lipoyltransferase 1 1.37133
RPS9 ribosomal protein S9 1.1603
GLRXP3 glutaredoxin (thioltransferase) pseudogene 3 1.15723
OXSM 3-oxoacyl-ACP synthase, mitochondrial 1.0741
LIPJ lipase, family member J 1.06296
LIAS lipoic acid synthetase 1.04833
ALAD aminolevulinate dehydratase 1.04331
PLA2G15 phospholipase A2, group XV 0.994652
EARS2 glutamyl-tRNA synthetase 2, mitochondrial 0.955439
HAGH hydroxyacylglutathione hydrolase 0.922322
MORN1 MORN repeat containing 1 0.917644
TXNRD3 thioredoxin reductase 3 0.90739
SELT selenoprotein T 0.884244
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial 0.863068
COG8 component of oligomeric golgi complex 8 0.856635
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.734666
MCAT malonyl CoA:ACP acyltransferase (mitochondrial) 0.684644
FASN fatty acid synthase 0.672026
IPP intracisternal A particle-promoted polypeptide 0.655602
UROS uroporphyrinogen III synthase 0.638434
GLO1 glyoxalase I 0.636295
GFM1 G elongation factor, mitochondrial 1 0.626909
SELK selenoprotein K 0.626483
GCAT glycine C-acetyltransferase 0.616285
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.601066
CDKN3 cyclin-dependent kinase inhibitor 3 0.599381
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial) 0.591812
DHPS deoxyhypusine synthase 0.585942
PKLR pyruvate kinase, liver and RBC 0.584686
SPAG1 sperm associated antigen 1 0.572578
PKM pyruvate kinase, muscle 0.546472
TARS threonyl-tRNA synthetase 0.543176
ELOVL6 ELOVL fatty acid elongase 6 0.539883
UPRT uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) 0.537827
IARS isoleucyl-tRNA synthetase 0.536183
MYOF myoferlin 0.535772
GGPS1 geranylgeranyl diphosphate synthase 1 0.525113
FMN2 formin 2 0.515716
ATG3 autophagy related 3 0.497826
RPL14 ribosomal protein L14 0.482467
SHMT1 serine hydroxymethyltransferase 1 (soluble) 0.473215
UROD uroporphyrinogen decarboxylase 0.471609
PGLS 6-phosphogluconolactonase 0.470406
OSGEP O-sialoglycoprotein endopeptidase 0.430253
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.41221
RPL4 ribosomal protein L4 0.41221
PROK2 prokineticin 2 0.402081
YME1L1 YME1-like 1 ATPase 0.390841
PRIMA1 proline rich membrane anchor 1 0.387365
PI3 peptidase inhibitor 3, skin-derived 0.386979
CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 0.372749
GK glycerol kinase 0.37045
GLUD1 glutamate dehydrogenase 1 0.349105
AARS alanyl-tRNA synthetase 0.343799
TP53INP1 tumor protein p53 inducible nuclear protein 1 0.321201
POTEI POTE ankyrin domain family, member I 0.318953
ACT actin-like protein (ACT) gene 0.315586
POTEF POTE ankyrin domain family, member F 0.312971
DERL1 derlin 1 0.311851
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.306632
RPL22 ribosomal protein L22 0.303655
PRIM1 primase, DNA, polypeptide 1 (49kDa) 0.296601
ACSS2 acyl-CoA synthetase short-chain family member 2 0.29586
HMBS hydroxymethylbilane synthase 0.291047
KARS lysyl-tRNA synthetase 0.283663
ACTG2 actin, gamma 2, smooth muscle, enteric 0.274101
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.255107
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.24713
ACTA2 actin, alpha 2, smooth muscle, aorta 0.246046
DHODH dihydroorotate dehydrogenase (quinone) 0.244962
CARS cysteinyl-tRNA synthetase 0.230958
CFD complement factor D (adipsin) 0.227752
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) 0.21716
STX6 syntaxin 6 0.214714
GSTA3 glutathione S-transferase alpha 3 0.205059
GSTA2 glutathione S-transferase alpha 2 0.203361
GSTA4 glutathione S-transferase alpha 4 0.203361
GSTA1 glutathione S-transferase alpha 1 0.201335
CFH complement factor H 0.196999
VIMP VCP-interacting membrane selenoprotein 0.195681
DLD dihydrolipoamide dehydrogenase 0.189857
MDH1 malate dehydrogenase 1, NAD (soluble) 0.18702
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.167125
FES FES proto-oncogene, tyrosine kinase 0.164315
TXN thioredoxin 0.159268
TPI1 triosephosphate isomerase 1 0.158692
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.157397
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 0.157397
HSPA4 heat shock 70kDa protein 4 0.156688