alitretinoin_rattus norvegicus_gpl85_mammary gland_gds2385 Gene Set

Dataset GEO Signatures of Differentially Expressed Genes for Small Molecules
Category transcriptomics
Type small molecule perturbation
Description small molecule perturbation identified as [small molecule]_[organism]_[GEO platform]_[GEO accession] (Gene Expression Omnibus)
External Link http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GDS2385
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Genes

95 genes differentially expressed following the alitretinoin_rattus norvegicus_gpl85_mammary gland_gds2385 small molecule perturbation from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.

increased expression

Symbol Name
ACLY ATP citrate lyase
ACTA2 actin, alpha 2, smooth muscle, aorta
ALB albumin
ANXA1 annexin A1
ANXA5 annexin A5
APOE apolipoprotein E
ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
CDC42 cell division cycle 42
CDO1 cysteine dioxygenase type 1
CES1 carboxylesterase 1
COX4I1 cytochrome c oxidase subunit IV isoform 1
COX7A2 cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
COX8A cytochrome c oxidase subunit VIIIA (ubiquitous)
CXCL14 chemokine (C-X-C motif) ligand 14
CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1
DCN decorin
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1
FABP4 fatty acid binding protein 4, adipocyte
GRN granulin
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1
HSPA8 heat shock 70kDa protein 8
HSPB1 heat shock 27kDa protein 1
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IFITM3 interferon induced transmembrane protein 3
LDHB lactate dehydrogenase B
LPL lipoprotein lipase
MGST1 microsomal glutathione S-transferase 1
MPC1 mitochondrial pyruvate carrier 1
MYL6B myosin, light chain 6B, alkali, smooth muscle and non-muscle
NACA nascent polypeptide-associated complex alpha subunit
NDUFB4 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa
NDUFB8 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa
PPIA peptidylprolyl isomerase A (cyclophilin A)
PSAT1 phosphoserine aminotransferase 1
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6
RBP4 retinol binding protein 4, plasma
RPL19 ribosomal protein L19
RPL21 ribosomal protein L21
RPL22 ribosomal protein L22
RPL23 ribosomal protein L23
RPL24 ribosomal protein L24
RPL39 ribosomal protein L39
RPL5 ribosomal protein L5
RPL8 ribosomal protein L8
RPS13 ribosomal protein S13
RPS27A ribosomal protein S27a
RPS29 ribosomal protein S29
RPS4X ribosomal protein S4, X-linked
RPS8 ribosomal protein S8
SEPP1 selenoprotein P, plasma, 1
SNCG synuclein, gamma (breast cancer-specific protein 1)
SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
THRSP thyroid hormone responsive
TNFRSF21 tumor necrosis factor receptor superfamily, member 21
TPT1 tumor protein, translationally-controlled 1
TUBA1A tubulin, alpha 1a
UBC ubiquitin C
UQCR11 ubiquinol-cytochrome c reductase, complex III subunit XI
VIM vimentin
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
ZFP36L1 ZFP36 ring finger protein-like 1

decreased expression

Symbol Name
ACTB actin, beta
CA3 carbonic anhydrase III
CLU clusterin
COL1A1 collagen, type I, alpha 1
COX1
CSN2 casein beta
CSN3 casein kappa
CST3 cystatin C
FASN fatty acid synthase
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
FN1 fibronectin 1
GLYCAM1 glycosylation dependent cell adhesion molecule 1 (pseudogene)
HBB hemoglobin, beta
KNG1 kininogen 1
LALBA lactalbumin, alpha-
MFGE8 milk fat globule-EGF factor 8 protein
MT-ATP6 ATP synthase F0 subunit 6
MT1A metallothionein 1A
RPL15 ribosomal protein L15
RPL18A ribosomal protein L18a
RPL27A ribosomal protein L27a
RPL6 ribosomal protein L6
RPL7A ribosomal protein L7a
RPLP0 ribosomal protein, large, P0
RPS11 ribosomal protein S11
RPS15 ribosomal protein S15
RPS3 ribosomal protein S3
RPSA ribosomal protein SA
SPTLC1 serine palmitoyltransferase, long chain base subunit 1
TF transferrin
UBB ubiquitin B