adventitious root Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description A root growing from a location other than the underground, descending portion of the axis of a plant, as from a stem or leaf. (BRENDA Tissue and Enzyme Source Ontology, BTO_0005273)
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Genes

66 proteins co-occuring with the tissue adventitious root in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
TTC1 tetratricopeptide repeat domain 1 1.76024
ABT1 activator of basal transcription 1 1.57699
NLRC3 NLR family, CARD domain containing 3 1.32867
SQLE squalene epoxidase 1.2109
LARS leucyl-tRNA synthetase 1.1869
GUSB glucuronidase, beta 1.17402
APC2 adenomatosis polyposis coli 2 1.14432
RNMT RNA (guanine-7-) methyltransferase 1.13856
MAT1A methionine adenosyltransferase I, alpha 1.09341
RPS16 ribosomal protein S16 1.02513
FDFT1 farnesyl-diphosphate farnesyltransferase 1 1.0037
RB1 retinoblastoma 1 0.997166
RPL32 ribosomal protein L32 0.921627
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1 0.890525
RNASET2 ribonuclease T2 0.887133
TECR trans-2,3-enoyl-CoA reductase 0.853788
SPX spexin hormone 0.851266
CNGB1 cyclic nucleotide gated channel beta 1 0.851266
SRM spermidine synthase 0.809386
PPCS phosphopantothenoylcysteine synthetase 0.803544
KLHL2 kelch-like family member 2 0.744214
RING1 ring finger protein 1 0.721577
HMOX1 heme oxygenase 1 0.712549
ATN1 atrophin 1 0.705583
ACO1 aconitase 1, soluble 0.67495
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.66925
WIPF2 WAS/WASL interacting protein family, member 2 0.665182
MYB v-myb avian myeloblastosis viral oncogene homolog 0.654618
CRYGD crystallin, gamma D 0.646911
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 0.643669
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.63274
PTGDR prostaglandin D2 receptor (DP) 0.599675
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.586828
CA7 carbonic anhydrase VII 0.573616
PAOX polyamine oxidase (exo-N4-amino) 0.572018
RHAG Rh-associated glycoprotein 0.55607
CCNB1 cyclin B1 0.546533
PRODH proline dehydrogenase (oxidase) 1 0.531879
AXIN2 axin 2 0.528323
HMGA1 high mobility group AT-hook 1 0.525955
DCXR dicarbonyl/L-xylulose reductase 0.507849
PITX1 paired-like homeodomain 1 0.485156
TP63 tumor protein p63 0.481648
HMX1 H6 family homeobox 1 0.480091
ZKSCAN7 zinc finger with KRAB and SCAN domains 7 0.432991
CNOT2 CCR4-NOT transcription complex, subunit 2 0.420766
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.415434
AMD1 adenosylmethionine decarboxylase 1 0.41087
CAT catalase 0.40366
SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit 0.402901
CHRFAM7A CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion 0.391553
AANAT aralkylamine N-acetyltransferase 0.388912
GUCY2C guanylate cyclase 2C 0.378372
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.376494
NPR1 natriuretic peptide receptor 1 0.376119
G6PD glucose-6-phosphate dehydrogenase 0.361527
SOD2 superoxide dismutase 2, mitochondrial 0.345928
ATR ATR serine/threonine kinase 0.328628
CA1 carbonic anhydrase I 0.313683
SLC35A2 solute carrier family 35 (UDP-galactose transporter), member A2 0.28887
TUBA1A tubulin, alpha 1a 0.244232
COL18A1 collagen, type XVIII, alpha 1 0.243605
CTSC cathepsin C 0.23961
TPO thyroid peroxidase 0.233731
AIF1 allograft inflammatory factor 1 0.228764
CSN1S1 casein alpha s1 0.214954